| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2484 |
|---|
| Symbol | |
|---|
| ID | 5835836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2786606 |
|---|
| End bp | 2787577 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641368286 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_001639950 |
|---|
| Protein GI | 163851907 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGC TCAACGCCCC TCTGACGGTC GGGCTCGTGG CGGTGGCCGC CGGTTCGCTC
GCCTACGTGT TCCTGATGCC CGCCCTCTCG GGCGAGCGGC GGGCCGAGCA GCGTCGCAAG
GCGCTGGGTC AGCCGCAGGC CGTGCTCGCG GAGCGCGGCG CGGCCGCCAG CCGCCGCGAA
CAGGTCGCTA AGAGCCTCAA GGAGCTGGAA GCCAAGAAGG ACAAGACCAA GGTCACGCTC
GAACTCCGCC TCGCCCGCGC CGGCCTCGAT TGGAGCCGCC AGAAGTATCG GGTCGTCTCG
GCGATCACCG CCGTCGTTCT CGCGCTGGCC GCCTTCCTCG TCTCGCACAA TGTGATCGTC
GCCGGGCTCG CCCTGTTCGT GGGCGGGTTC GGCCTGCCCG CCTGGTGGCT CAAGCGGCGG
CAGAAGCGGC GGGTCGAGGC CTTCATCGAG GAATTGCCCA ACGCCATGGA TGTGGTGGTG
CGCGGTCTGC GCTCCGGCAT CCCCCTAGGC GACTGCCTGC GCATGATCGC GCGCGAGGCG
AAGGAGCCTC TGCGCAGCGA GTTCCGCGTG ACGATGGAGT CCCAGGCGCT CGGCCTGTCG
ATGTCCGACG CGATCCTGCG CATGTACGAG CGCGTGCCCG TCACCGAGGT GAACTTCTTC
TCGATCGTGA TCGGCATTCA GCAGAAGGCC GGCGGCAACC TCTCGGAGGC GCTTGGAAAC
CTGTCGCGGG TGCTGCGCGA GCGTAAGAAG ATGGCCGGCA AGATCCAGGC GATGAGCATG
GAGGCCAAGG CGTCGGCCGC CATCATCGGT GCCCTACCGT TCGTGGTCGG CGGGGGGACC
TACCTGTCGA GTCCCGATTA CACCGCGCTC CTTTGGACCA CCTCGTTCGG CAAGATCGCC
CTCGTGATCT CAGGTCTGTG GATGCTGACC GGCGTCTTCG TGATGAAGAA GATGATCAAT
TTCGACATCT GA
|
|---|
| Protein sequence | MSALNAPLTV GLVAVAAGSL AYVFLMPALS GERRAEQRRK ALGQPQAVLA ERGAAASRRE
QVAKSLKELE AKKDKTKVTL ELRLARAGLD WSRQKYRVVS AITAVVLALA AFLVSHNVIV
AGLALFVGGF GLPAWWLKRR QKRRVEAFIE ELPNAMDVVV RGLRSGIPLG DCLRMIAREA
KEPLRSEFRV TMESQALGLS MSDAILRMYE RVPVTEVNFF SIVIGIQQKA GGNLSEALGN
LSRVLRERKK MAGKIQAMSM EAKASAAIIG ALPFVVGGGT YLSSPDYTAL LWTTSFGKIA
LVISGLWMLT GVFVMKKMIN FDI
|
|---|
| |