Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2483 |
Symbol | |
ID | 5835835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2785161 |
End bp | 2786609 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641368285 |
Product | type II secretion system protein E |
Protein accession | YP_001639949 |
Protein GI | 163851906 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.930862 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGTC GACGCTCCAA TACCGCCGCG GCTCCCACCC CGGCCGCGGC CGCAGCCGGA CCGGCGAACG TCACCCCGCC GGTCCTCCAG CAGGAGGCCG TGCGCGCGCG TCCCGATGCG CCGAGCGCCC CGGTGCCTCA GGCGCAGCAG CCGAAATCCG AGGATTACTT CCGCACGAAG AGCATGATCT TCGGCGCGCT GATCGAGGCG ATCGACCTCG CCCAGCTCGC ACGGCTCGAA GGCGAGGCGG CCCGCGAGGA AATCCGCGAC ATCGTCTCCG AGATCATCGG TCTCAAGAAC ATCGTGCTGT CGATCGCCGA GCAGGAGGAG TTGCTCGACG ACATCTGCAA CGACGTGCTC GGTTACGGTC CGCTGGAGCC GCTGCTCGCC CGCGACGACA TCGCCGACGT GATGGTCAAC GGCGCCGACC GGACCTTCAT CGAGGTCGCC GGCAAGATCC AGCTCACCTC CGTGCGCTTT CGCGACAACC AGCAACTGAT GAACATCTGC CAGCGGATCG TCAGCCAGGT CGGCCGCCGC GTGGACGAGT CCTCGCCGAT CTGCGACGCG CGCCTCCCCG ACGGCTCGCG CGTCAACGTC ATCGCTCCGC CGCTCGCCAT CGACGGGCCG GCGCTGACCA TCCGTAAGTT CAAGAAGGAC AAGCTCACCC TCGACCAGCT CGTGCGCTTC GGGGCGATCT CGCCGGAGGG CGCGAAGATC CTGCAGATCA TCGGCAAGGT CCGCTGCAAC GTCGTGATCT CGGGCGGCAC CGGCTCGGGC AAGACGACCC TGCTCAACTG CCTCACCGCC TTCATCGAGC ACGACGAGCG CGTCATCACC TGCGAGGACG CGGCCGAGCT TCAGCTCCAG CAGCCGCATG TGGTTCGCTT GGAGACCCGG CCGCCGAACC TGGAGGGCCA GGGGCAGGTC ACCATGCGCG ACCTCGTCAA GAACTGCCTG CGCATGCGCC CCGAGCGCAT CATCGTCGGC GAGGTGCGCG GACCCGAAGC CTTCGATCTG CTGCAGGCGA TGAACACCGG CCACGACGGC TCGATGGGCA CGCTGCACGC CAACTCCCCG CGCGAATGCC TCGCGCGTAT CGAATCGATG ATCACGATGG GCGGCTTCTC GCTGCCCTCG CGCACGCTGC GCGAGATGAT CACCGGCTCG ATCGACGTGA TCATCCAGGC CATGCGCATG CGCGACGGCT CCCGGCGTAT CACCCACATC ACCGAGGTGA TGGGGATGGA GGGTGAGGTC ATCATCACCC AGGACCTGTT CGTCTACGAC GTGCTCGGCG AGGACGCGAA TGGGCGCCTG ATCGGCCGCC ACCGCTCCAC TGGGATCGGC CGTCCGCGCT TCTGGGAGCG GGCACGCTAT TACGGCGAGG AGCGGGCGCT GGCCGCCGCC CTCGACGCCG CCGTGGCCGA AGGGGAGGCG GCATCGTGA
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Protein sequence | MFGRRSNTAA APTPAAAAAG PANVTPPVLQ QEAVRARPDA PSAPVPQAQQ PKSEDYFRTK SMIFGALIEA IDLAQLARLE GEAAREEIRD IVSEIIGLKN IVLSIAEQEE LLDDICNDVL GYGPLEPLLA RDDIADVMVN GADRTFIEVA GKIQLTSVRF RDNQQLMNIC QRIVSQVGRR VDESSPICDA RLPDGSRVNV IAPPLAIDGP ALTIRKFKKD KLTLDQLVRF GAISPEGAKI LQIIGKVRCN VVISGGTGSG KTTLLNCLTA FIEHDERVIT CEDAAELQLQ QPHVVRLETR PPNLEGQGQV TMRDLVKNCL RMRPERIIVG EVRGPEAFDL LQAMNTGHDG SMGTLHANSP RECLARIESM ITMGGFSLPS RTLREMITGS IDVIIQAMRM RDGSRRITHI TEVMGMEGEV IITQDLFVYD VLGEDANGRL IGRHRSTGIG RPRFWERARY YGEERALAAA LDAAVAEGEA AS
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