Gene Mext_2483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2483 
Symbol 
ID5835835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2785161 
End bp2786609 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content68% 
IMG OID641368285 
Producttype II secretion system protein E 
Protein accessionYP_001639949 
Protein GI163851906 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.930862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGTC GACGCTCCAA TACCGCCGCG GCTCCCACCC CGGCCGCGGC CGCAGCCGGA 
CCGGCGAACG TCACCCCGCC GGTCCTCCAG CAGGAGGCCG TGCGCGCGCG TCCCGATGCG
CCGAGCGCCC CGGTGCCTCA GGCGCAGCAG CCGAAATCCG AGGATTACTT CCGCACGAAG
AGCATGATCT TCGGCGCGCT GATCGAGGCG ATCGACCTCG CCCAGCTCGC ACGGCTCGAA
GGCGAGGCGG CCCGCGAGGA AATCCGCGAC ATCGTCTCCG AGATCATCGG TCTCAAGAAC
ATCGTGCTGT CGATCGCCGA GCAGGAGGAG TTGCTCGACG ACATCTGCAA CGACGTGCTC
GGTTACGGTC CGCTGGAGCC GCTGCTCGCC CGCGACGACA TCGCCGACGT GATGGTCAAC
GGCGCCGACC GGACCTTCAT CGAGGTCGCC GGCAAGATCC AGCTCACCTC CGTGCGCTTT
CGCGACAACC AGCAACTGAT GAACATCTGC CAGCGGATCG TCAGCCAGGT CGGCCGCCGC
GTGGACGAGT CCTCGCCGAT CTGCGACGCG CGCCTCCCCG ACGGCTCGCG CGTCAACGTC
ATCGCTCCGC CGCTCGCCAT CGACGGGCCG GCGCTGACCA TCCGTAAGTT CAAGAAGGAC
AAGCTCACCC TCGACCAGCT CGTGCGCTTC GGGGCGATCT CGCCGGAGGG CGCGAAGATC
CTGCAGATCA TCGGCAAGGT CCGCTGCAAC GTCGTGATCT CGGGCGGCAC CGGCTCGGGC
AAGACGACCC TGCTCAACTG CCTCACCGCC TTCATCGAGC ACGACGAGCG CGTCATCACC
TGCGAGGACG CGGCCGAGCT TCAGCTCCAG CAGCCGCATG TGGTTCGCTT GGAGACCCGG
CCGCCGAACC TGGAGGGCCA GGGGCAGGTC ACCATGCGCG ACCTCGTCAA GAACTGCCTG
CGCATGCGCC CCGAGCGCAT CATCGTCGGC GAGGTGCGCG GACCCGAAGC CTTCGATCTG
CTGCAGGCGA TGAACACCGG CCACGACGGC TCGATGGGCA CGCTGCACGC CAACTCCCCG
CGCGAATGCC TCGCGCGTAT CGAATCGATG ATCACGATGG GCGGCTTCTC GCTGCCCTCG
CGCACGCTGC GCGAGATGAT CACCGGCTCG ATCGACGTGA TCATCCAGGC CATGCGCATG
CGCGACGGCT CCCGGCGTAT CACCCACATC ACCGAGGTGA TGGGGATGGA GGGTGAGGTC
ATCATCACCC AGGACCTGTT CGTCTACGAC GTGCTCGGCG AGGACGCGAA TGGGCGCCTG
ATCGGCCGCC ACCGCTCCAC TGGGATCGGC CGTCCGCGCT TCTGGGAGCG GGCACGCTAT
TACGGCGAGG AGCGGGCGCT GGCCGCCGCC CTCGACGCCG CCGTGGCCGA AGGGGAGGCG
GCATCGTGA
 
Protein sequence
MFGRRSNTAA APTPAAAAAG PANVTPPVLQ QEAVRARPDA PSAPVPQAQQ PKSEDYFRTK 
SMIFGALIEA IDLAQLARLE GEAAREEIRD IVSEIIGLKN IVLSIAEQEE LLDDICNDVL
GYGPLEPLLA RDDIADVMVN GADRTFIEVA GKIQLTSVRF RDNQQLMNIC QRIVSQVGRR
VDESSPICDA RLPDGSRVNV IAPPLAIDGP ALTIRKFKKD KLTLDQLVRF GAISPEGAKI
LQIIGKVRCN VVISGGTGSG KTTLLNCLTA FIEHDERVIT CEDAAELQLQ QPHVVRLETR
PPNLEGQGQV TMRDLVKNCL RMRPERIIVG EVRGPEAFDL LQAMNTGHDG SMGTLHANSP
RECLARIESM ITMGGFSLPS RTLREMITGS IDVIIQAMRM RDGSRRITHI TEVMGMEGEV
IITQDLFVYD VLGEDANGRL IGRHRSTGIG RPRFWERARY YGEERALAAA LDAAVAEGEA
AS