| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2480 |
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| Symbol | |
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| ID | 5835263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 2781503 |
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| End bp | 2783011 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641368282 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001639946 |
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| Protein GI | 163851903 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.906186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG CCTCTCGCTT CCGCGGACTT GCCCTTCTCC TACTTTCCGG CGCCGGTCTC
GCGTCGGCGA TGCTGTCCGG CCCGGCCTCG GCGCAAGCCG GCCTCTCCGG TGCCTCCCCC
GTCCTGACGA TCGGCGCCAA CGAGGCGGCG GTCTCCCGTC GGGTCGAACT GAGCAAGGGC
CGCTCCCTCA TCGTTGACCT ACCGCGCGAC GCCAAGGAAG TGTTCGTCGC CAACCCGGCG
GTTGCGAACG CGGTCGTCCG CTCGAGCCGC AAGCTCTTCC TGATCGGCAT CGACAACGGC
GCCACCTCGA TCTTCGTGAT GGATGGCGAG GGACGCCAGA TCGCGGCGCT CGATGTCACC
ATCGCCCGCG ACATCAATGT CCTGCGGCAG TCGCTGCAGC AGAGCCTGCC CGGCGGTCGG
TTCGATGTGA AAGCGGTCGG GGATTCGCTG GTTCTCTCGG GCAGCGTGAA CTCGACCTCG
GAGGCGCAGC AGGCGCTCGA CATCGCCAAC GCCTTCGTCG GCATCGCGGC CGGCGGCGGC
GTCGCGACTC GCGGCGCCGT CATCAACAAC CTAACGATCC GCAACAAGGA TCAGGTGATG
ATCCGCGTCA CCGTGGTCGA GGTGGCGCGG ACCGTTCTGA AGCAGTTCGG TATCAGCACG
AGTGGCAATT GGTCGGCTCT CAACCCGCTG GGCGGCAACT TCCTGACGAA CAATACGGGT
TTTCCGTTGA CCGGTTCGCG GAGCCCGGAC GCCAACGCTC TGACGGCATC GGTCCAGACG
GGCGGATTCT CCTTCAAGGC CACCTTGCGC GCCTTCGAGC AAGCCGGCGT GTCCCGCATC
CTGGCCGAGC CGACGCTGAC CGCGATTTCC GGTGAGTCGG CAAAATTCAC GGCCGGAGGT
GAAATTCCGG TGCCGCTGAG CTGTTCGGCG GCTTCGACGG TCTCGATCGG CACGTCGGTC
AGCCAGGGCT GCGTCGTCGC GCTGACCTAC AAGCCCTACG GCGTGAGCCT ATCGTTCACT
CCCGTCGTCA TGGCCGAGAA TCGGATTTCG GTCCGGATCG CCACCGATGT GGTCGATCTC
GATCCCCAGA ACAGCTTCAC CTACTACCTC AACGATCGTC CGACCCCCGT GCCGGGCACG
ACGAAGCGCA GCTCCGAGAC CACGGTCGAG CTCGCCTCCG GCGCGACGAT GATGACCGCG
GGCCTGATCC AGCAGAAGAA CCGGGCTGCG ATCTCCGGTC TGCCCGGGCT GATGAACCTG
CCGATCCTCG GTGCCCTGTT CCGCTCCCGC GATTACCAGC GGGACGAGAC CGAGTTGATG
ATCATGGTCA CCCCCTACAT CGCGCAGCCG ATGGAAGCGC GGCAGGTGCA GCGGCCGGAC
GACGGTTTCG TCGATGCGCC GGACGGGCAG GCGGTGCTGC TCGGACGTCT GAACAAGATC
TACGGCACGG TCGGCGGCGG CACCCTCGGG CCGGCCTATC GCGGCCGGGT CGGCTTCATC
GCCGACTGA
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| Protein sequence | MTTASRFRGL ALLLLSGAGL ASAMLSGPAS AQAGLSGASP VLTIGANEAA VSRRVELSKG
RSLIVDLPRD AKEVFVANPA VANAVVRSSR KLFLIGIDNG ATSIFVMDGE GRQIAALDVT
IARDINVLRQ SLQQSLPGGR FDVKAVGDSL VLSGSVNSTS EAQQALDIAN AFVGIAAGGG
VATRGAVINN LTIRNKDQVM IRVTVVEVAR TVLKQFGIST SGNWSALNPL GGNFLTNNTG
FPLTGSRSPD ANALTASVQT GGFSFKATLR AFEQAGVSRI LAEPTLTAIS GESAKFTAGG
EIPVPLSCSA ASTVSIGTSV SQGCVVALTY KPYGVSLSFT PVVMAENRIS VRIATDVVDL
DPQNSFTYYL NDRPTPVPGT TKRSSETTVE LASGATMMTA GLIQQKNRAA ISGLPGLMNL
PILGALFRSR DYQRDETELM IMVTPYIAQP MEARQVQRPD DGFVDAPDGQ AVLLGRLNKI
YGTVGGGTLG PAYRGRVGFI AD
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