| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2388 |
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| Symbol | |
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| ID | 5831680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 2641042 |
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| End bp | 2642859 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641368187 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001639854 |
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| Protein GI | 163851811 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.55342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATC GTCCGCTCGC CGAATTGTTC GAGCCCACCA CCCGCGAGCG TTGGCGCCAA
GCCGTCGAAA CCGCGCTGAA GGGCGCCGAT TTCGAGAAGC GTCTTGTTTC GAAGACTGCC
GACGGCCTGC GCATCGAGCC CTTCTACGAG CCGGCCGCTG CGGTGGCCCA GCCGGTGCGG
GCGCCCGGCC CGTGGCGTCT GGCGCAGCGC ATCGACCATC CCGATGCCGA GAAGGCCGGA
GCCCAGGCGC TGGCCGACCT CGAAGGCGGT GCCGATGCGC TGGTCCTCGT CCATCGCGAC
GCCCGTGCCG CCCGCGGCTT CGGCCTCGAA CTTCCATCCG TCGATGCGCT GGACGCGGCG
CTGACGGGCG TGATGCTGCC GCTCATCGCC CTTCGGCTCG ATGCCGGTCT GGCCGGATTC
GAGACGGCGG CGCTTCTCAA GCAACTGATC GAGCGCCGCG GCGACGACCC GTCCGCGCTC
GACCTCGATC TCGGTCTCGA CCCGATCGGC ACCCGCGCCG CCACCGGCCG GCTCGACCAG
GGGTGGGAGG CACGCCTCTC CGAGACCGTT ACCGCCTTCG CCGGATATCA CGGGCGCGCG
GCCTTGGCCG ACGCCCGGCC CTATCACGAG GCGGGGGCGA GCGAGGTGCA GGAACTGGCT
GCCGTGCTCG CCACGGCGGT CGCCTATCTG CGGGCGTTGG AGGCCGGCGG CCATGATCTG
GCGGTCGCGC GCGACCAGAT CGCAGTCCTG CTGGTGGCGG ATGCCGACGA ATTCCTGACC
ATCGCCAAGT TCCGGGCGAT CCGGCGGCTC TGGGCCCGGG TCGAGCAGGC CTGCGGCCTC
GAGCCGAAGC CGCTGCGGGT CCTGGCCGAG ACCGCGTGGC GGATGATGAG TCGCCGCGAT
CCTTTCGTGA ACATCCTGCG GACCACCATG GCCTCAGCCT CCGCCGGCCT TGGCGGGGCG
GATTCAGTGA CCGCATTGCC CTACACCCTG GCGCTCGGCC TGCCCGACGC CTTCGCCCGG
CGGGTGGTGC GCAACAGCCA GATCGTGCTG ATCGAGGAAT CGAACCTCGC CAAGGTCTCC
GATCCGGCGG CCGGCGCGGG CGGCTTCGAG GCGCTGACCG CCGAACTGAC CGAGAAGGCC
TGGGCGGCCT TCCAGGAAAT CGAGCGGGAG GGCGGGATCG GTGCGAGCCT GGAGGCCGGC
GCCTTCGCAG GTCGGATCGC GGCGGTCGCC GGGGCACGGG CACGGGCGGT CGCGACCCGC
AAAGAGCCGC TGACCGGCGC CAGCGAGTTC CCCTTCCTCG CTGAGAAGCC GGTGACGGTG
TTCGACGTGG CGCCGAACCC CGCCGCTTCC TCGGAGGGGG CCTTGCCGTC GCAACGCCTC
GCCGAACCCT ACGAGGCCCT GCGCGACGCC TCCGACGCCG TCCGCGAGCG GACGGGTAAG
CGCCCGGCGG TCTTCCTGGC CAATCTCGGT CCCGTGGCGG TCCACAATGC CCGCTCGACC
TTCGCCGCCA ACGCCTTCGC CGCGGGCGGT ATCGAGGCCA TCGGCAATGA CGGCTTCTCC
GACATGCAAG CCCTGGCCGA TGCCTTCAAG GCGTCGGGTG CACGGATCGC CTGCCTGTGC
TCGTCCGACA CCGTCTACCA GACCGAGGCC GTGCCCGCGG CCGAGGCGCT GAAGGCGGCC
GGCGCCGGCA CGATCTACCT CGCCGGCAAA CCCGCCGAGG CCGAGGCTCT GCGCCAAGCG
GGCATCGGAG GCTTCCTGTT CGCCGGTTGC GACCTGTTGG CGCTCCTGCG GGAGGCGGCC
GAGCGCGCGA CGGGCTGA
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| Protein sequence | MEDRPLAELF EPTTRERWRQ AVETALKGAD FEKRLVSKTA DGLRIEPFYE PAAAVAQPVR
APGPWRLAQR IDHPDAEKAG AQALADLEGG ADALVLVHRD ARAARGFGLE LPSVDALDAA
LTGVMLPLIA LRLDAGLAGF ETAALLKQLI ERRGDDPSAL DLDLGLDPIG TRAATGRLDQ
GWEARLSETV TAFAGYHGRA ALADARPYHE AGASEVQELA AVLATAVAYL RALEAGGHDL
AVARDQIAVL LVADADEFLT IAKFRAIRRL WARVEQACGL EPKPLRVLAE TAWRMMSRRD
PFVNILRTTM ASASAGLGGA DSVTALPYTL ALGLPDAFAR RVVRNSQIVL IEESNLAKVS
DPAAGAGGFE ALTAELTEKA WAAFQEIERE GGIGASLEAG AFAGRIAAVA GARARAVATR
KEPLTGASEF PFLAEKPVTV FDVAPNPAAS SEGALPSQRL AEPYEALRDA SDAVRERTGK
RPAVFLANLG PVAVHNARST FAANAFAAGG IEAIGNDGFS DMQALADAFK ASGARIACLC
SSDTVYQTEA VPAAEALKAA GAGTIYLAGK PAEAEALRQA GIGGFLFAGC DLLALLREAA
ERATG
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