| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2373 |
|---|
| Symbol | |
|---|
| ID | 5831817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2623628 |
|---|
| End bp | 2625151 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641368172 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_001639839 |
|---|
| Protein GI | 163851796 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.467623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAGC CGGTGAAATC CCCCCAAGCC TCGCATCGGC TGCTCACCGT TGAGGCGATG
CGCCGGGTCG ATGCCGCGGC GATCGCCCGC GGCACGCCGG GCCTGACGCT GATGGAGGCG
GCGGGCGCCG CCGTCGCCGC GCGTGCCCGC GCCATGGTGC CGGAGCGTGG CCGGGTGCTC
GTGCTGTGCG GCCCCGGCAA CAATGGCGGC GACGGGTTCG TGGCCGCCCG CCTGCTGGAT
GAGGCCGGCT ACCCCATCGA TCTGCGCCTG CTCGGCGAGC GCGCCGCGCT CAAGGGCGAT
GCCTCCCTCG CCGCCGAGGC CTGGACCGGC CCGGTGGGTA CCGTAGAGGC CGCGATTCCG
GCGGCCGACC TCATCATCGA TGCCGTGTCC GGCGCCGGCC TCTGCCGCGA TCTGGAAGGG
GCAGCCCGCG CCCTCGTGGA AGCGGTGAAC CGCTCGGGCA TCCCCGTGCT GGCCGTGGAT
GTGCCGAGCG GCATCGACGG CGACAGCGGT GCGGTGCGCG GGCTCGCGGT GGAGGCGACC
GAGACGGTGA CCTTCGTCGC GCCGAAGCCC GGCCACCTGC TCCAGCCCGG CCGGACCCAT
TGCGGCGCGC TGCACGTCGC CGATATCGGC ACGGGCGAGG CCGCGTTCGC CGCCGGGATC
GCCGGAGAGA CCCGCGCGCT GTATCGCAAC GCGCCCGGCC TGTGGGCGCT GCCGCGGCTC
ACCGCCGACA GCCACAAATA CACCCGCGGC CATGCCCTGG TGCTGTCGGG CCCCGCCTAT
CGCACCGGTG CGGCCCGGCT CGCCGCCCGC GGCGCGCTGC GGGTCGGCGC GGGGCTCGTC
ACCATGGCTT CACCCGCCTC GGCGCTGGCG GAGAACGCCG CCCAGCTCAC CGCGATCATG
CTGCGCCCTT GCGAGAATGC CGACGACCTC GATGACATGC TCGCCGACGA GCGGCTGAAC
GCGCTGCTGC TCGGCCCCGG CCTCGGGACC GGCCCGGCAA CCTGCGACCT CGTCGCGGTG
GCGGCCAATG CCGGGCGCGC CCTGGTGCTC GACGCCGACG CGCTCACGAG CTTCCGCAGC
GAGGTGCGCA CCCTCGCCCG CCACATCCGC GACGGCGAGG CGCGGGCCGT GCTCACGCCG
CACGAGGGCG AGTTCGTGCG GCTGTTCTCC GGCACGGAGG CCGTGGCGGA GGGGCTGACG
AAAGTGGAGC GGGCCGCGCG GGCGGCGGAG ATCGCCGGGG CGGTCGTGGT GCTGAAGGGC
GCCGACACGG TGATCGCGGC CCCCGACGGA CGCGCGGCGA TCAACGACCA CGGCACGCCG
CATCTCGGCA CCGCCGGCTC CGGCGACGTG CTCGGTGGCC TCGTCGCCGG GTTGCTGGCG
CAGGGCATGG ACCCGTTCGA GGCCGCCTGC GCCGCCGTGT GGCTGCACGG CGATGCGGGC
CTGCGCTTCG GGCCGGGGCT AATCTCCGAG GATCTGCCGG AGATGATTCC GGCGGTTCTG
CGCGACCTCG CCGGCCGCGC CTGA
|
|---|
| Protein sequence | MHEPVKSPQA SHRLLTVEAM RRVDAAAIAR GTPGLTLMEA AGAAVAARAR AMVPERGRVL
VLCGPGNNGG DGFVAARLLD EAGYPIDLRL LGERAALKGD ASLAAEAWTG PVGTVEAAIP
AADLIIDAVS GAGLCRDLEG AARALVEAVN RSGIPVLAVD VPSGIDGDSG AVRGLAVEAT
ETVTFVAPKP GHLLQPGRTH CGALHVADIG TGEAAFAAGI AGETRALYRN APGLWALPRL
TADSHKYTRG HALVLSGPAY RTGAARLAAR GALRVGAGLV TMASPASALA ENAAQLTAIM
LRPCENADDL DDMLADERLN ALLLGPGLGT GPATCDLVAV AANAGRALVL DADALTSFRS
EVRTLARHIR DGEARAVLTP HEGEFVRLFS GTEAVAEGLT KVERAARAAE IAGAVVVLKG
ADTVIAAPDG RAAINDHGTP HLGTAGSGDV LGGLVAGLLA QGMDPFEAAC AAVWLHGDAG
LRFGPGLISE DLPEMIPAVL RDLAGRA
|
|---|
| |