| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2371 |
|---|
| Symbol | |
|---|
| ID | 5831585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2620866 |
|---|
| End bp | 2621984 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641368170 |
|---|
| Product | Sel1 domain-containing protein |
|---|
| Protein accession | YP_001639837 |
|---|
| Protein GI | 163851794 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.312198 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCTTTG AAGCCCTCTT CCCTCTGCGG GGGGAGGGAA GGGCGCGCGG GCGCACGGGG
AAAGCCGCAC GCCGAACGGG AACCTTGTCC CTCGCGGTCC TGAGCGCCTG CGTCGTTCTC
GCGCTCGATA GCGGCGCTCT GCACGCGGCC CCGAAGCAGC CCGCCCCGAA GGAGCCTGTC
GCGCAGACGC CGGCCAAGCC GAACCTGTTC GACCTCAAGC GTGAGCTGCC CTCGCCCTAC
TCGGCCAACG TCCAGGGGGC GCAGCCCACG ACGGCGAACC CGAATGCCGA CGCGGCCTAC
GGGGCCTATC AGCGCGGTCG CTACGTCACC GCCTTCCGCG AGGCGACCAA GCGGATCGAG
GCGAATCCGA AGGACGCCGC GGCGATGACG CTGCTCGGGG AACTCTACAA CCAGGGACTC
GGGGTCAAGC CGGATCCCAA ACGCGCCCAC GAATGGTACC GGCTGGCGGC CGTGCAGAAC
GATCCCAACG CCATGGCCTC CCTCGGCCTG ATGGCGATGG ACGGGCGCGG ACAGCCCAAG
GACGAGAAGG CCGGCCGAAC CTGGCTCGAA CAGGCGGCCC GCAAGGGACA GCCCAGCGCC
TGCTACAATC TCGCTCTGAT CCAGCTCGCG AGCGACAAGC CGGCGGATCT GGCCGCGGCC
CTGGCCAATT TCCGGGCGGC GGCCGAGGCC GAGATCCCCG CCGCGCAATA CGCGCTGGGC
GTGCTCTACC TCCAGGGCAA GGGCGTCTCC AAGGACACGA CCCAGGCCGC GCAATGGTTT
CGGCGCGCCG CCGACAATGG CGATCTCGGC GCCGAGGTCG AGTTCGCGAT CCGGCTGTTC
AACGGCGACG GCGTTCCCAA GGACGAGACC CGCGCCGCCC GCTACTTCCT GCACGCGGCC
CAGCGCGGCA ACGCCATCGC CCAGAACCGG ATCGCCAAGC TCTACGTCGC CGGCCGCGGC
GTGCCCAAGA ACCTGGTCGA GGCGGCGGCC TGGAACCTCA CCGCAGCCTC GCAGGGCCGC
GCTGATGCCG GCCTCGATCA GGCGACCGCC GGCCTCAACG CGGACGAGCG CAAGCGCGCC
GAGGCGCTGG CGGCGGACCG GGTGAGCCTC GCGCCCTAA
|
|---|
| Protein sequence | MTFEALFPLR GEGRARGRTG KAARRTGTLS LAVLSACVVL ALDSGALHAA PKQPAPKEPV
AQTPAKPNLF DLKRELPSPY SANVQGAQPT TANPNADAAY GAYQRGRYVT AFREATKRIE
ANPKDAAAMT LLGELYNQGL GVKPDPKRAH EWYRLAAVQN DPNAMASLGL MAMDGRGQPK
DEKAGRTWLE QAARKGQPSA CYNLALIQLA SDKPADLAAA LANFRAAAEA EIPAAQYALG
VLYLQGKGVS KDTTQAAQWF RRAADNGDLG AEVEFAIRLF NGDGVPKDET RAARYFLHAA
QRGNAIAQNR IAKLYVAGRG VPKNLVEAAA WNLTAASQGR ADAGLDQATA GLNADERKRA
EALAADRVSL AP
|
|---|
| |