| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2357 |
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| Symbol | |
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| ID | 5832808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 2609239 |
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| End bp | 2610246 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641368156 |
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| Product | D-cysteine desulfhydrase |
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| Protein accession | YP_001639823 |
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| Protein GI | 163851780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.344749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCTCA CCCGCTTCCC CCGTGTCGCG CTCACCGACG GGCCGACGCC GATCCGCTCC
CTCGACCGTC TCTCGACCCA TCTCGGGCCC GAGCTGAACG GCGTCCGCCT GTTCGTGAAG
CGCGACGACA TCGGCCCGGT GGGTTTGGGC GGCAACAAGC TGCGCAAGCT CGAATTCCTG
CTCGGTCAGG CGCTGGCGGA GCGGGCCGAC ACGGTGATCA CCGTCGGTGC GCTGCAATCG
AACCACGCCC GGCTCACCGC CGCCTCCGCC GCGCGGATGG GGCTCGCCTG CGAACTGTTC
CTCACCCGCA GCGTCCCGCG GGAGGACGCC GACTACACGG CCAACGGCAA CCGGCTGTTG
CAGGATCTGT TCGGCGCCCA TGTGCACCTG CTGCCGGGCG AGGCGGATTC GCTGGCGCAG
GCCGAGGCGC GGGCGGAGGA GTTGAGGGCC GAGGGGCGGC GCGTCCACGT CTTCCCCTCC
GGCGGGTCGA GCCCGCTCGG CTGTCTCGGC TACGCGGCCT GCGCCGCCGA GATCCTGGAG
CAGGCGGCCA ATCTCGGCCT CGCCTTCGCC CGCATCGTCG TGCCGAACGG CAGCTCCGGC
ACCCATGCGG GGCTCGCCGC CGGCCTCGCC GCCGCCGGCC GCGATCCGCA TCTGGCCCAA
TCCTACACGG TGCTCGCCCC CGAGCCCGAG GCGACGGCCG CAACGCTGGC CAGGGCCCGC
GACACCCTCG CGCTGATCGA TGGCAGCCAG ACGCTCTCCG ATGACGCCAT TCGCGTGGAC
GGCGCCCATC GCGGGCTGGG CTACGGCATC CCGACCGAGG GCATGCGCGA GGCGGTGCGG
CTGATGGCCC GCACGGAAGG ACTGCTGCTC GACCCCGTCT ACAGCGGCAA GGCGTTCGCC
GGGCTGCTCC ACGACGTGCG CGCCGGCCGG TACGAGCGCG GCGCGGCGGT GCTGTTCGTG
ATGACCGGCG GCGTGCCGGG GTTGTTTGCC TATCGGAGCG AGTTTTAG
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| Protein sequence | MVLTRFPRVA LTDGPTPIRS LDRLSTHLGP ELNGVRLFVK RDDIGPVGLG GNKLRKLEFL
LGQALAERAD TVITVGALQS NHARLTAASA ARMGLACELF LTRSVPREDA DYTANGNRLL
QDLFGAHVHL LPGEADSLAQ AEARAEELRA EGRRVHVFPS GGSSPLGCLG YAACAAEILE
QAANLGLAFA RIVVPNGSSG THAGLAAGLA AAGRDPHLAQ SYTVLAPEPE ATAATLARAR
DTLALIDGSQ TLSDDAIRVD GAHRGLGYGI PTEGMREAVR LMARTEGLLL DPVYSGKAFA
GLLHDVRAGR YERGAAVLFV MTGGVPGLFA YRSEF
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