Gene Mext_2341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2341 
Symbol 
ID5831778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2591679 
End bp2592425 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content67% 
IMG OID641368140 
Productpyrimidine 5'-nucleotidase 
Protein accessionYP_001639807 
Protein GI163851764 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCCTTC CCGGCGAGAG TCACTTCACC ACCTCCGACG CCCGCGGGTT CTCCCACGTC 
GATACCTGGG TGTTCGATCT CGACAACACG CTCTACCCGA GCGACGCGCG GGTCTGGCCG
CAGGTGGACG AGCGGATCAC GCTCTACGTC ATGCGGCTCT ACGGGCTCGA CGCGATCTCG
GCGCGCGCCC TGCAGAAGCA TTTCTACCAC CGCTACGGCA CCACCCTGAA GGCGCTGATG
GTGGAGGAAG GGGTCGATCC GCACGACTTC CTCGATTTCG CCCACGACAT CGACCACTCG
ACGATCAAGC TCGACGAAGC GCTCGGGACC GCGATCGAGC ATCTGCCGGG CCGCAAGCTG
ATCCTCACCA ACGGATCGCG CCGCCACGCG GAATCGGTCG CGGGCAAGCT CGGCATCCTC
GACCATTTCG AGGACGTGTT CGACATCGCC GACGCCGACT TCATCCCCAA GCCCGACCGC
GGCACCTACG AGCGCTTCCT TCTGCGCCAC GGGGTCGATC CCCGGCGCTC GGCCCTGTTC
GAGGACATCG CCCGCAACCT CGTGGTGCCG CACGACCTCG GCATGGCGAC CGTGCTGGTG
GTGCCGCCGA CGCCCGATCC GTTCCGCGAA CTGTTCGAGC AGGAGGCGGT GCAGGAGCCG
CATATCGACC ACATCACCAG CGATCTGGCG GCCTTCCTCG TGCGCTGCGT GCTGCCGGTC
GTCCCGCCCG AGCCCGCCGC GCCGTGA
 
Protein sequence
MLLPGESHFT TSDARGFSHV DTWVFDLDNT LYPSDARVWP QVDERITLYV MRLYGLDAIS 
ARALQKHFYH RYGTTLKALM VEEGVDPHDF LDFAHDIDHS TIKLDEALGT AIEHLPGRKL
ILTNGSRRHA ESVAGKLGIL DHFEDVFDIA DADFIPKPDR GTYERFLLRH GVDPRRSALF
EDIARNLVVP HDLGMATVLV VPPTPDPFRE LFEQEAVQEP HIDHITSDLA AFLVRCVLPV
VPPEPAAP