Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2341 |
Symbol | |
ID | 5831778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 2591679 |
End bp | 2592425 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641368140 |
Product | pyrimidine 5'-nucleotidase |
Protein accession | YP_001639807 |
Protein GI | 163851764 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTCCTTC CCGGCGAGAG TCACTTCACC ACCTCCGACG CCCGCGGGTT CTCCCACGTC GATACCTGGG TGTTCGATCT CGACAACACG CTCTACCCGA GCGACGCGCG GGTCTGGCCG CAGGTGGACG AGCGGATCAC GCTCTACGTC ATGCGGCTCT ACGGGCTCGA CGCGATCTCG GCGCGCGCCC TGCAGAAGCA TTTCTACCAC CGCTACGGCA CCACCCTGAA GGCGCTGATG GTGGAGGAAG GGGTCGATCC GCACGACTTC CTCGATTTCG CCCACGACAT CGACCACTCG ACGATCAAGC TCGACGAAGC GCTCGGGACC GCGATCGAGC ATCTGCCGGG CCGCAAGCTG ATCCTCACCA ACGGATCGCG CCGCCACGCG GAATCGGTCG CGGGCAAGCT CGGCATCCTC GACCATTTCG AGGACGTGTT CGACATCGCC GACGCCGACT TCATCCCCAA GCCCGACCGC GGCACCTACG AGCGCTTCCT TCTGCGCCAC GGGGTCGATC CCCGGCGCTC GGCCCTGTTC GAGGACATCG CCCGCAACCT CGTGGTGCCG CACGACCTCG GCATGGCGAC CGTGCTGGTG GTGCCGCCGA CGCCCGATCC GTTCCGCGAA CTGTTCGAGC AGGAGGCGGT GCAGGAGCCG CATATCGACC ACATCACCAG CGATCTGGCG GCCTTCCTCG TGCGCTGCGT GCTGCCGGTC GTCCCGCCCG AGCCCGCCGC GCCGTGA
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Protein sequence | MLLPGESHFT TSDARGFSHV DTWVFDLDNT LYPSDARVWP QVDERITLYV MRLYGLDAIS ARALQKHFYH RYGTTLKALM VEEGVDPHDF LDFAHDIDHS TIKLDEALGT AIEHLPGRKL ILTNGSRRHA ESVAGKLGIL DHFEDVFDIA DADFIPKPDR GTYERFLLRH GVDPRRSALF EDIARNLVVP HDLGMATVLV VPPTPDPFRE LFEQEAVQEP HIDHITSDLA AFLVRCVLPV VPPEPAAP
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