| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2300 |
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| Symbol | |
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| ID | 5835649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 2548985 |
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| End bp | 2550271 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641368099 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001639766 |
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| Protein GI | 163851723 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00840255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00785546 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCAGA AACAAACGCC TAGAGCGTCG TCCTGGATCA GGTATCCAGG ACGACGCTCT
AGCGCGGCGG CGCGGCTCTA CGCTGCCGGC GCCGTCGCGC TGGCGCTGGT GGCGCCGATG
ATGGCCCTCG CCAACCGGTC GAGTCCGCTT CTCGTCGGCG TGGCCGCGCT GCTGTTCCTG
GCGGGCACCG TCGCCGAGCG CGGCGGGCGC GCCGCCTCCG ACCTGATCAC CCCCCTGCGC
GCCCCGCTCG GCCTCGCCGC GCTGGCCTTC CTCGCCTGGT GTCTCGTCTC GCTGGCCTGG
AGCCCGTTTC CCGCGCTCTG GGGCCGTGTG CTGTCCGAAT TCCTGCCGAC GCTCGCCGCC
GCGGCGATCC TCGCCCGGCT CGCGCCGGCC CGGCTGCCGC CCTGGGCGCT GCCCCTCGGC
GCCGGCCTGC TCGCCGCAGC CTGCCTTTTC ATCGCGGCAA GCCTCGCCCT CGGGCTGGCG
CCGCAGGCCT GGCTCGGGCA GCGCGTGGCC CTGTTCATGT TCAACCGCCC GCTGCTGACG
GTGCTGCTGC TGGCCGGGCC CATCGCCGCC TTCCTCGCCC TGCGCGGCCA CCGCCTCGCC
GCCGTGATCC TGCTCGGGGT GACGGCGCTG GCGATCCTGC GCTCGATCAG CGGCGCGGCC
ATGCTCGGGC TGCTCGCGGG CGCTGTGATG TTCGCGGTCG GGCGCTTGGC GCCCCGATCC
GTGGCCCTGG CGCTCGCGGC GCTGACCCTC GGGCTCGCCT TCGCCCTTGC CCCGGTCGAG
GGCGACATCC TCCACCGGCT GATGCCGGAG GCGGCGCATG AGCGGCTGAC GCAGTCTTCG
TCGCGGGCGC GGGTCGCCAT CGCCCAGAGC TTCGCCGCCG CGGTGGCGCA GGCGCCCTGG
ATCGGCTCCG GCTACGGCAT GGGCCTGCGC TTCGCCGAGG TACCGGCGTC GCAAGCTCTC
GAGCCGGAGA TGCGGGCGAT GCTGGCCGTC GGCCATCCGC ATAACAGCTT CCTCCAGATC
TGGGCCGAAC TCGGCTTCGT CGGCGCGGCG CTCGCGGCTT TGGTCGCCTT CCTGGCCCTG
CGGGCGGCGG CCGCCTTGCC GCGGCTCCTG TTCGCCACGG CGCTCGGCTT GCTGGGCGCG
GCGGTGGCGG TGATGTTCGT CGAGCACGGC GCGTGGCAGG GATGGTGGAC GGCGGGCCTC
GGGGCCGCCA TCACATGGCT GCGGGCGGCG GCTTGCGCCA AGCCCCCATA CGAGCCCGCA
CACGAGAGTG AAGACGCGCG CGCATGA
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| Protein sequence | MMQKQTPRAS SWIRYPGRRS SAAARLYAAG AVALALVAPM MALANRSSPL LVGVAALLFL
AGTVAERGGR AASDLITPLR APLGLAALAF LAWCLVSLAW SPFPALWGRV LSEFLPTLAA
AAILARLAPA RLPPWALPLG AGLLAAACLF IAASLALGLA PQAWLGQRVA LFMFNRPLLT
VLLLAGPIAA FLALRGHRLA AVILLGVTAL AILRSISGAA MLGLLAGAVM FAVGRLAPRS
VALALAALTL GLAFALAPVE GDILHRLMPE AAHERLTQSS SRARVAIAQS FAAAVAQAPW
IGSGYGMGLR FAEVPASQAL EPEMRAMLAV GHPHNSFLQI WAELGFVGAA LAALVAFLAL
RAAAALPRLL FATALGLLGA AVAVMFVEHG AWQGWWTAGL GAAITWLRAA ACAKPPYEPA
HESEDARA
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