| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2291 |
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| Symbol | |
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| ID | 5830928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 2540568 |
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| End bp | 2542523 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641368090 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001639757 |
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| Protein GI | 163851714 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.140751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATGA AATTCATTTA CGGCCGCCGA GAGCTCCTGA GCGGTATCGT ACCGAGCTAT
ACCGACCCGG AAGCCTGCAT CCGTCAGATC GGGGAGTTGC AAAAGCAGAT CCCGTCGCTC
TACGCGCTGC TCTCCGTCAA CGCCTGCGCC CTCGCATTCA CCCATTACCC TCTTGCGCCG
GCTTGGCTGA CCGTCGGGCT GCCCGGCGCG ATGATCGGCC TGTGTGTGGT GCGGGCCACG
CATTGGTGGC ATCTCCGGCC GCAGTCGATC TCCGGAGAAG AGGCCGTCAA ACGGCTGCGC
GGCACCAGCC TCCTCACCGT CCTGTTCTCG GCCCTCTTCG TCGGCTGGGC GATGAAGCTC
ACGTCCTATG GCGGACCGTT CGAGCAGGGT CACGTCGCCA TCTTCGTCGC GATCACCGTC
ATCGCCTGCA TCTTCTGCCT GACGCATCTG CCGGCGGCGG CGCTCGTCGT GACGATCATC
GTCATGGGCA GCTTCCTGAT TCACTGCTTC ACGAGCGGCA ACAGCGTCTT CATCGCGATC
GCGCTCAACA CCGCCTTCGT CACGGTGGTG ATGGTGCGCA TCCTCACCAA CAACTTCCTG
GCCTTCCTCC AACTGCTCGA GTCCAAGGCT GAAGCCCAGC GGCTCGGCGA GGAGAATCAG
CGCCTGGCGC ATACCGACAG CCTGACCGGG TTGCCCAATC GGCGCTATTT CTTCCAGCGC
CTCGATGCGC TGATCGCCGC CTCGGCGACC GGAAACGCCG CCTTCGCCCT CGCGATCTTC
GACCTCGACC GGTTCAAGCC GATCAACGAC ACGTTCGGCC ACACCGCCGG AGACCGGGTG
CTGGAAGAGA CCGGGCGCCG TCTCAGCGCC TTCGCCGCGG ACGGCGTGAC GATCGCGCGC
CTCGGCGGCG ACGAGTTCGG CGTGCTGATC CACGCGGCCG ACCGCACGGC CGACGCGGTC
GAGCTTTGCA ACCGCATCTG TACGGCGCTG CACGCGCCGA TTTCGCTCGG CGAGACGCAG
GTCGTGCCGG GATGCTCCGG CGGTCTGGCG CTGTATCCCA GCGCCGGACG GGCGGCGGAT
GCGCTGTTCG ACCGGGCCGA TTATGCGCTC TACCATTCCA AGGAGCGCAA GCGCGGGACC
ACGACCCTGT TCTCGCAGGA GCATGAGGAC GCGATCCGGG CCGAGCGCGC AGTGGAGGCC
GCCCTCCAGA GTGCGGATCT CGCCGCCGAG ATGGAGATGC ACTACCAGCC GATCCTCGAC
ACGGTGACAG ACCGCATCAC CACGGTCGAG GCGCTGGCGC GCTGGACGAG CCCCAAGCTC
GGGCGCGTGC CGCCCGACCG CTTCATCGGC GTGGCGGAGC GCTGCGGCAT GATCCACTCG
GTGACCCTGC TTCTCCTGCG CAAGGCGCTC GCCGACGCGG CCCGGCTTCC GGACGACATC
GGACTATCGT TCAACCTCTC CTCGCACGAC CTTGCCTCGC CCGAGACGGT CATCGCGATC
CTCGCCGCGG TCCGGCAGAG CGGGCTCGAT CCCCGACGGA TCACGCTGGA GCTGACGGAG
ACCGCGCTGA TGCGCGACTT CGAGGGGGCG CAAAAGGCGA TCACGCTCCT GCGCGCACTC
GGCATCAAGA TCGCGCTGGA CGATTTCGGG ACGGGGTATT CGAGCCTGAA CTACGTCCAC
CGCCTGCCGC TCGACCGGAT CAAGATCGAC CGCGGCTTCA TGGCCGACGT CGAATCCGAC
CTCGGGCGCA GCGTCGTGAT CACGATCCTC GATCTCTGCC AGAACCTCGG CCTGGACGGC
ATCGCCGAGG GAATCGAGAC CACGGAGCAA TTGAGCGCGG TGCGCCGTCA CGGCTGTCGC
TACGTTCAGG GCTACCTGAT CGGGGTGCCG ATGCCGATGA CGGACCTGCT CGGCGGCCTT
CGCGGCACGG CGGAGGCCGA GCCGGTCTCC GCCTGA
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| Protein sequence | MRMKFIYGRR ELLSGIVPSY TDPEACIRQI GELQKQIPSL YALLSVNACA LAFTHYPLAP
AWLTVGLPGA MIGLCVVRAT HWWHLRPQSI SGEEAVKRLR GTSLLTVLFS ALFVGWAMKL
TSYGGPFEQG HVAIFVAITV IACIFCLTHL PAAALVVTII VMGSFLIHCF TSGNSVFIAI
ALNTAFVTVV MVRILTNNFL AFLQLLESKA EAQRLGEENQ RLAHTDSLTG LPNRRYFFQR
LDALIAASAT GNAAFALAIF DLDRFKPIND TFGHTAGDRV LEETGRRLSA FAADGVTIAR
LGGDEFGVLI HAADRTADAV ELCNRICTAL HAPISLGETQ VVPGCSGGLA LYPSAGRAAD
ALFDRADYAL YHSKERKRGT TTLFSQEHED AIRAERAVEA ALQSADLAAE MEMHYQPILD
TVTDRITTVE ALARWTSPKL GRVPPDRFIG VAERCGMIHS VTLLLLRKAL ADAARLPDDI
GLSFNLSSHD LASPETVIAI LAAVRQSGLD PRRITLELTE TALMRDFEGA QKAITLLRAL
GIKIALDDFG TGYSSLNYVH RLPLDRIKID RGFMADVESD LGRSVVITIL DLCQNLGLDG
IAEGIETTEQ LSAVRRHGCR YVQGYLIGVP MPMTDLLGGL RGTAEAEPVS A
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