Gene Mext_2285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2285 
Symbol 
ID5834677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2532112 
End bp2533800 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content70% 
IMG OID641368084 
Productchemotaxis sensory transducer 
Protein accessionYP_001639751 
Protein GI163851708 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.345435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0714982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCTCC AAACACTTCC CATTCGCAGC AAGCTCATCG CTTCATTCAC GGTGCTGACG 
ATCCTTCTCG TCAGCTTAGG GGTTCTGGGC CTCGTCGGAA CGCAGACGAT GCGCGACCAA
GCGCTCGATA TCGAACGCAA TTGGCTTCCC AGCGTGCGCC TGCTCGGCGA GATCGACACG
GCGGCGGCGC GGATGAACAC CGTGATGCTG CGGCATACGC AAGCGACCGA CCCGCAGATG
GTGTCCGCGA TGGACAAGGA CTTCGAGCGC TTCGGCAAGC TGATCGACGA CAAGCGGGCA
GCCTACGAAC GGCTCATCGC GAATGCCGAG GAGCGGGCGC TCTACGAGAC CTATGTGCGG
GATACCGCGA CCTTCGAGAA CGAACGGCGC AACGTAATGG ACCTGTCGCG CCAGGGCCGG
AAGGCGGACG CTTTCTCCTA CTACGAGTCG AAGGGTCTCG CGCCGCGCCG GGCGATGTCG
AACTCGCTGG AGAAGCTGGT CAATTTCAAC AACGAGGGTG CCGCCCGCGC GATGGCGGCG
GGCGAGGCCG TGTTCCAGCA GGTGCGCACG ATCGGCCTTG CCGTCCTCGC CCTCGGGCTC
GGCCTCGCGG TCCTGCTCGC GGTCCTGATC ACCCGCGGCG TGACCCGCGG CATCGCCTCC
GTGGTCGGGC CGATGCAGGC GCTGGCCGCG GGCGACCTTT CGGTCACGAT CCCGCATCAG
GGCCAGCGGA CCGAGATCGG CACGATCGCC GACGCGGTTC AGATCTTCAA GGCCGGGCTG
ATCCGCATGC GCGACCTCGA AGAGGAGAGC GCCGCGGCTC GCGCCGGGGC GGAGGCGCAG
CGCAAGGCGG CGATGCGCGA GATGGCCGAG CGGTTCGAGG GTGCGGTCGG CGGCGTCGTC
AGCCTCGTCT CGTCGGCTGC GGCCCAGTTG CAGGCCTCGG CGCACGGCAT GACCGGTGCC
GCGACCCGGA CCGCCGGCCA GTCGGTCAGC GTGGCCGCCG CGGCCGAGGA AGCCGCCACC
AACGTCAACA CCGTGGCGGC GGCCGCCGAG GAGCTGGGCG CATCGGTGCA GGAGATCGGC
CGGCAGGTCA GCGGCTCCTC GACGCTCGCC CAGGCGGCGG TGGGAGAGGC GGCGCAGACG
GCGGCCCATG TCCGGGCGCT CAGCGCGGCC GTCTCCAAGA TCGGCGACGT CGTCACCATG
ATCACCACGA TCGCGGGGCA GACCAACCTG CTCGCGCTCA ATGCCACCAT CGAGGCGGCC
CGCGCGGGCG AGGCAGGCCG CGGCTTCGCG GTGGTGGCCG CCGAGGTCAA GGAACTCGCC
AACCAGACCG CGCGCGCCAC GGAGGAAATC TCGGGCCAGA TCGGCCGCAT TCAGGAGACC
ACCGGCCACG CGGTCTCGGC TATCGGCAGC ATCACCGGGC GCATCGAGGA GATCAGTTCG
GTGGCGGCCT CGATCGCCGC GGCGGTGGAG CAGCAGGGTG CAGCGACCCA GGAGATCGTG
CGCAACGTCG CCCAGGCGGC GATGGGTGCG GGCGAGGTGA CGAGCAACAT CACGGGCGTG
GCCCAGGCCG CCGAGGAAGC CGGGGCGACC GCAGCCGAAG TGCTCGCCGC CTCTTCCGAA
CTGTCGCGCC AGTCCGAGCA CCTCTCGGCG GAAGTCGGCC GCTTCCTCGC GAACGTGCGC
GCCGCCTGA
 
Protein sequence
MSLQTLPIRS KLIASFTVLT ILLVSLGVLG LVGTQTMRDQ ALDIERNWLP SVRLLGEIDT 
AAARMNTVML RHTQATDPQM VSAMDKDFER FGKLIDDKRA AYERLIANAE ERALYETYVR
DTATFENERR NVMDLSRQGR KADAFSYYES KGLAPRRAMS NSLEKLVNFN NEGAARAMAA
GEAVFQQVRT IGLAVLALGL GLAVLLAVLI TRGVTRGIAS VVGPMQALAA GDLSVTIPHQ
GQRTEIGTIA DAVQIFKAGL IRMRDLEEES AAARAGAEAQ RKAAMREMAE RFEGAVGGVV
SLVSSAAAQL QASAHGMTGA ATRTAGQSVS VAAAAEEAAT NVNTVAAAAE ELGASVQEIG
RQVSGSSTLA QAAVGEAAQT AAHVRALSAA VSKIGDVVTM ITTIAGQTNL LALNATIEAA
RAGEAGRGFA VVAAEVKELA NQTARATEEI SGQIGRIQET TGHAVSAIGS ITGRIEEISS
VAASIAAAVE QQGAATQEIV RNVAQAAMGA GEVTSNITGV AQAAEEAGAT AAEVLAASSE
LSRQSEHLSA EVGRFLANVR AA