| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2284 |
|---|
| Symbol | |
|---|
| ID | 5834676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2531380 |
|---|
| End bp | 2531967 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641368083 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001639750 |
|---|
| Protein GI | 163851707 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.151549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.0451993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCC CCGACGACGA CCTCCTACGC CTGCCCGAGG GCAGCGCGCT GCCCTACCGC
CCCTGCGTGG GCGTGACCCT GTTCCACCGC GACGGCCGCG TCTTCATCGG CCGGCGCAAG
CGCGAGGCGG GCCCCGAGCA TGTCGATGGC GATCTCGCGT GGCAGATGCC GCAGGGCGGG
ATCGACGAGG GGGAAGCCCC CCTCGCCGCG GCCCTGCGCG AACTCCATGA GGAGACCAAC
GTGCCGGCCG ACGCCGTCAC GCTGCTCGGC GAAACCCGCG ACTGGCTCGC CTACGACCTG
CCGCCGGCGG TGATGAAGCA GGGCTGGAAG GGCCGCTACC GCGGCCAGCG CCAGAAATGG
TTCGCCTTCG GGCTCACCGG GAATGAATCG GCGATCGACG TGGACGCCCC CGGCGGCGGC
CATCACAAGC CCGAATTCGA GGCGTGGCGC TGGGAGCGGC TGGAGGCGCT GCCGGACCTC
ATCGTCCCCT TCAAGCGTCC GGTCTACGAA GGCGTCGTCG CGGCCTTCTC GGGGCTGAAG
GGCTGGCATG GCGCCGGGGA CAATGGGACC GGGGACAACC CGGCATGA
|
|---|
| Protein sequence | MTRPDDDLLR LPEGSALPYR PCVGVTLFHR DGRVFIGRRK REAGPEHVDG DLAWQMPQGG
IDEGEAPLAA ALRELHEETN VPADAVTLLG ETRDWLAYDL PPAVMKQGWK GRYRGQRQKW
FAFGLTGNES AIDVDAPGGG HHKPEFEAWR WERLEALPDL IVPFKRPVYE GVVAAFSGLK
GWHGAGDNGT GDNPA
|
|---|
| |