| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2260 |
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| Symbol | |
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| ID | 5832648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 2507435 |
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| End bp | 2508259 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641368059 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001639726 |
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| Protein GI | 163851683 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.145597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCTT CTCCCGACCT GCCGCACCAG GGCCGCGTTC CCGTCTTCAA CCTGCCGAGA
GTCGTCACGG TCTCGATCGC GGTTCTGGCC GTGATCCACG TCGTCCGCAC CGTCCTGCCG
GATGAACTCG ACCTGTCGGT GCTCCTCAAC CTCGCCTTCA TTCCCGCCCG CTGGACCGCC
GCGTTCGATC CCGCATCCGC GGCCGAGATC GTCCGGGCGG CGGGGGAGGG GGCAGGCAGG
CCCGACATCG CTACGGCGCG GCAGGAATTC GCCCGCTACC TCGTCGCCGA GCCGTCAGCG
ATGCCCTGGA CCGGCGCGAC CTACGCCCTG CTGCACGGCT CGTGGGTGCA CCTCATCTTC
AACGCGGTGT GGCTCGCCGT CTTCGGCACC CCGGTCGCGC GTCGCTACGG GGTCGTGCGC
TACGGCCTGC TGGCACTCGC CGGCGTCGTG GTCGGTGCCC TGGTCCACCT TTTCGTCGAT
CCCTACAGCC TGATGCCGCT GGTCGGCGCC TCGGCCGGCA TCTCGGCCCT CATGGCGGCG
GCGGCCCGCT TCGTGTTTCA GCCTCCGCCG CCCTTCGTCG CCGGGGCGCC CTGGCAATTG
CCGCCGCGGC CGACGCTGCA GACGATCCCG GAATTGCTGC GCAACCGCCC GGCGGTGCTG
TTCCTCGGGG TCTGGTTCGT CACCAACCTG CTGTTCGGCG TCCTGTCACT GCCGCTCGGG
GGCAGCGAAG GGCCGATCGC CTGGGACGCG CATCTCGGCG GCTTCGCCGC CGGGTTCTTC
CTCTTGCCGC TGATGGAGCG CGGCGCGCGC CACGCGCGGC GTTAA
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| Protein sequence | MDASPDLPHQ GRVPVFNLPR VVTVSIAVLA VIHVVRTVLP DELDLSVLLN LAFIPARWTA
AFDPASAAEI VRAAGEGAGR PDIATARQEF ARYLVAEPSA MPWTGATYAL LHGSWVHLIF
NAVWLAVFGT PVARRYGVVR YGLLALAGVV VGALVHLFVD PYSLMPLVGA SAGISALMAA
AARFVFQPPP PFVAGAPWQL PPRPTLQTIP ELLRNRPAVL FLGVWFVTNL LFGVLSLPLG
GSEGPIAWDA HLGGFAAGFF LLPLMERGAR HARR
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