Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2235 |
Symbol | |
ID | 5831929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2482698 |
End bp | 2483201 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641368034 |
Product | AsnC/Lrp family regulatory protein |
Protein accession | YP_001639701 |
Protein GI | 163851658 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.161745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACTCGA TCGACCTGAA GATCCTCGCG CTCCTGCAGA AGGACGCCAC GCTCTCCATC GCCGCCATCG GCGAGCAGGT CGGGCTGTCG CAGACCCCGT GCTGGAAGCG GATTCAGCGC CTTGAAGCCG ACGGCGTGAT CGACCGGCGC GTGGCCGTGC TCGACCCGGT GAAGCTGGGG CTCGGCCTCA CCGTTTTCGT CTCCATCGAG ACCGCCGACC ATTCCAAGGA CTGGCTGGAG CAATTCGCCG ACCGGATCGC GGCGATGCCG GAGGTGCTCG AATTCTACCG CATGGCCGGC GACGTCGATT ACATGCTCCG CGTCGTCGTG GCCGACATGG CGGCCTACGA CACGTTCTAT AAGAACCTGA TCGCGACCCT GCCTCTCAAG AACGTGACCT CGCGCTTCGC GATGGAGAAG GTGAAATCGA CGACCGCCCT GCCGTTGCCG GCGCCGCCCC CGCGGGGACG AGCCGAGCCG CGGCTGGCGG TGGTCGGAGA ATAA
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Protein sequence | MDSIDLKILA LLQKDATLSI AAIGEQVGLS QTPCWKRIQR LEADGVIDRR VAVLDPVKLG LGLTVFVSIE TADHSKDWLE QFADRIAAMP EVLEFYRMAG DVDYMLRVVV ADMAAYDTFY KNLIATLPLK NVTSRFAMEK VKSTTALPLP APPPRGRAEP RLAVVGE
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