Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2227 |
Symbol | |
ID | 5834289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 2471735 |
End bp | 2474146 |
Gene Length | 2412 bp |
Protein Length | 803 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641368026 |
Product | diguanylate cyclase |
Protein accession | YP_001639693 |
Protein GI | 163851650 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCTATCC CGACCTCAGA CGCGTCCGCC GCCGCGCTGG TCCAGCATTG GCGCAGTTGC CGGTCCCGCC CCGGGGCGAT GCCGGGTTAC GATGCCGTCG TCCTGGGCAG GCTCGGCCGT CTGGCCGACC GCTGCGCCCT GGTCGCCACC CGCGAAGGCC GGGCCGAACG CATCCTCTGG GGTGGCACGG GATTTCGCGA CTGGTTCGAG GACGAGATCC GCGACCGGCC GCTCGTGCAG ATGCCCGATG AGATCCGCCG GCCGATCGAG GAGATCGGGG TCGCCGCCCT GCGCACCGGC GAGCCGGCCG GGGCTCGATG CGACCGAATC ACCGACGGCG TCGTCACCAC CTGGAAGCTC GTCGGCGTCC CGCTCGCCAA CGGCAGCGGA ACGCCGCTCC TCCTCGTCCA CGTCGCCAGC GAGGGCGTGC GCACCGAGCT GATGCAGGCG ATGTTCGGCG CGACCGGCCA GGGCCTGATG GCGCTCGGCG CGATCCGCGA GGCATCGGGT GCGGTCGCGG ACTTCAAGAT CGTCGCCCTC AACCAGGGCG CCGCGGCGAT TCTCGGGCGG CCGGTCGCGA GCCTGCAATG GCAGCGGCTG GGCGATCTCG TGCCCGTTCG GCTCGGCGTG ACACACCGTC TGTCGGGCGT CCTGGGATGC GCCGACCGGG CGACGTTCGA ACTCGCCGTG CCGCGCGCCG ACCGGACGAC GCTGCATCTG AAGGTGGAGG CGCAGGCCAT CGGCGATCTC GTCGCCGTCG CCATGACCGA TGTCGGGGAC ATCAAGGCGC GCGAGGCCTC GTTCCGGTTC CTGTTCGAGA GCAATCCGCT GCCGATGTGG CTGGTCGATC AGGATTCGGC CCGCTTCGTC GCCGTGAACG AGGCGGCGGT CGCCCATTAC GGCTACAGCC GCGAAGCCTT CCTGGCCCGG GGCCTGCAGG ACCAGTCGGA AGCCGTCGCG TTCAGTTTTG CCCGCGACGG CCGCCTGCAC CGCCATCGTC GGGCCGACGG CTCGTTGATC GACGTGACGC TGTTCGAGCG CAGCCTCGCC TTCGAAGGTC GCCCGGCCGT GCTCGGCGCG GCCATCGACG TCACCGAGCA GCGCCGTGCC GAGGCGCGCA TCACCCACAT GGCGCACCAC GATGCGCTGA CAGGCCTGCC GAACCGGGCG CTGTTCACGA CCCGCCTCGC GGAGGCGATT ACCGAGCATG CCCGCACCGG CGCGGGCGCC GCCCTGCTCT GCCTCGACCT CGACAAGTTC AAGCTCGTCA ACGACACCCT CGGCCACCCG GCGGGCGACA CCCTGCTCCG AGCGGTGGCG GACCGGATCA CGGCATGCCT GCACGGGGAG GATCTGGTCG CGCGCCTCGG CGGCGACGAG TTCGCGGTTC TGCTGCGTAC CCCCGACGCC GGGACCGTGT CCGCCGTCGC CGGCCGGATC ATCGAGGCGT TGTCACACCC CGTCAGGCTC GGCGACCGGG AATGCCAGAT CGGCGTGAGC GTCGGCATCG CCTGCCTGCC CGAACACGGA ACCGATTCCG ATACCCTGCT GCGGCATGCC GACCTCGCTC TCTACCGGGC GAAGGCGGAT GGCGGCAGCA TCGCCCATTG TTTCGAGGCG GCGATGGACA GTTGGGACCG GTCCCGACGC CGACGGGAGG CCGACCTGCA CGAGGCCTTC GCCCGGGGCG ATCTCGCGCT CGCCTACCAG CCGGTCGTGG GCGTCCGCTC GCGGGCGATC GTCGGGTTCG AGGCGCTGCT GCGCTGGCAC CACCCGGTCG AGGGAGCGAT CCCGCCGTCT GAATTCGTGC CGCTGGCCGA GGAAACGGGC CTGATCGTGC CGATCGGCGC CTGGGTGCTG CGACAAGCCT GCGCCGAGGC GAGCCTGTGG GCCGATCCGG TTCGGATCGC GGTGAACCTC TCGCCGGTGC AGTTCCGCGA TCCCGGCCTC GTCGCGACGG TGCGCGAGGC GCTCGCCTTT TCCGGGCTCG CCCCGCACCG GCTCGAACTG GAGGTCACAG AATCGGTGCT GCTGGCCGCG AGCGAGGCCA ACGTCGCTAC GCTGCATGCC CTGCGGGATC TCGGCGTACG GATTGCGATG GACGATTTCG GAACGGGCTA TTGCTCGTTG AGCTACCTGC AGAAGTTTCC CTTCGACAAG ATCAAGATCG ACCGCTCGTT CGTAAGCCGG CTCGGCGAGG ATCCGCACTC GACCGCGATC GTGCAGGCGG TGATCGGCCT CGGCGCAAGC CTCGGCATCG TCACCGTGGC CGAGGGTGTC GAGACCGAAG TCCAGTTCGC CCATCTGCGG GCCGAGGGCT GCGAGGAGGT GCAGGGCTAC CTGTTCGGTC GGCCAATCCC CGCACCGCAG GCCGTCGCGC CGATTCGGCG GGAGCCGGAC GTCGCCGCGT GA
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Protein sequence | MPIPTSDASA AALVQHWRSC RSRPGAMPGY DAVVLGRLGR LADRCALVAT REGRAERILW GGTGFRDWFE DEIRDRPLVQ MPDEIRRPIE EIGVAALRTG EPAGARCDRI TDGVVTTWKL VGVPLANGSG TPLLLVHVAS EGVRTELMQA MFGATGQGLM ALGAIREASG AVADFKIVAL NQGAAAILGR PVASLQWQRL GDLVPVRLGV THRLSGVLGC ADRATFELAV PRADRTTLHL KVEAQAIGDL VAVAMTDVGD IKAREASFRF LFESNPLPMW LVDQDSARFV AVNEAAVAHY GYSREAFLAR GLQDQSEAVA FSFARDGRLH RHRRADGSLI DVTLFERSLA FEGRPAVLGA AIDVTEQRRA EARITHMAHH DALTGLPNRA LFTTRLAEAI TEHARTGAGA ALLCLDLDKF KLVNDTLGHP AGDTLLRAVA DRITACLHGE DLVARLGGDE FAVLLRTPDA GTVSAVAGRI IEALSHPVRL GDRECQIGVS VGIACLPEHG TDSDTLLRHA DLALYRAKAD GGSIAHCFEA AMDSWDRSRR RREADLHEAF ARGDLALAYQ PVVGVRSRAI VGFEALLRWH HPVEGAIPPS EFVPLAEETG LIVPIGAWVL RQACAEASLW ADPVRIAVNL SPVQFRDPGL VATVREALAF SGLAPHRLEL EVTESVLLAA SEANVATLHA LRDLGVRIAM DDFGTGYCSL SYLQKFPFDK IKIDRSFVSR LGEDPHSTAI VQAVIGLGAS LGIVTVAEGV ETEVQFAHLR AEGCEEVQGY LFGRPIPAPQ AVAPIRREPD VAA
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