| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2182 |
|---|
| Symbol | rplO |
|---|
| ID | 5832444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2436126 |
|---|
| End bp | 2436635 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641367980 |
|---|
| Product | 50S ribosomal protein L15 |
|---|
| Protein accession | YP_001639648 |
|---|
| Protein GI | 163851605 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0200] Ribosomal protein L15 |
|---|
| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.34852 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA ACGAGATCCG CGATAACGAA GGGGCCACCA AGGCCCGCAT GCGCGTCGGC
CGGGGCATCG GCTCCGGCAA AGGCAAGACC GGTGGTCGCG GCGTGAAGGG TCAGAAGGCC
CGGAGCGGCG TGTCCATCAA GGGCTTCGAG GGCGGTCAGA TGCCGCTGCA TCGTCGCCTG
CCCAAGCGCG GCTTCAACAA CATCCACGCC CATGACCTGA ACGAGGTGAA TCTCGGCCGG
GTGCAGCAGG CGGTGGATGC CGGCAAGCTC GACGCGAACG CCGCCGTTAC GGTGGAAGCG
CTGGTCAAGG CCGGGATCAT CTCCCGTGCC CGTGACGGCG TGAAGCTGCT CGGTGTCGGC
GAGCTGACGT CGAAGCTTAG CTTCGAAGTG ACCCGCGCCT CCAAGTCGGC CATCGAGGCT
GTCGAGAAGG CTGGCGGTTC GGTGACCACG ACCTTCGCCG CCGGCGTCGC CCATCGCGGC
GCGGCGGAAG GCGCGGTTGC GTCGGCCTGA
|
|---|
| Protein sequence | MKLNEIRDNE GATKARMRVG RGIGSGKGKT GGRGVKGQKA RSGVSIKGFE GGQMPLHRRL
PKRGFNNIHA HDLNEVNLGR VQQAVDAGKL DANAAVTVEA LVKAGIISRA RDGVKLLGVG
ELTSKLSFEV TRASKSAIEA VEKAGGSVTT TFAAGVAHRG AAEGAVASA
|
|---|
| |