| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2097 |
|---|
| Symbol | |
|---|
| ID | 5831154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2349677 |
|---|
| End bp | 2350540 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641367894 |
|---|
| Product | acyl-CoA thioesterase II |
|---|
| Protein accession | YP_001639563 |
|---|
| Protein GI | 163851520 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1946] Acyl-CoA thioesterase |
|---|
| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.768998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.00217835 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACC CCGTCGATGC GCTCCTCGCG ATCCTCGATC TGGAGCGCCT GGAGACCGAT
CTGTTCCGCG GGATCAGCCC GCGAATCGGC TGGCCGCGGG TGTTCGGGGG GCAGGTCGTG
GCGCAGGCGC TCGTCGCGGC CTCCCGCACG GTCGAGGCGC CCCGCCCGCC CCATTCCCTG
CACGCCTATT TTCTCCTCGG CGGCGATCCG GCGGTGCCGA TCGTCTACGA GGTCGAGCGC
ATCCGCGACG GCGGCAGCTT CACCACCCGC CGGGTCAAGG CGATCCAGAA GGGCCGGGCG
ATCTTCGCCA TGTCGGTCTC GTTCCACATC ACGGAGGAGG GCGTCGATCA CGCCGCCGAT
CTTCCCGACG TGCCGGGACC GGGCGCGCTG GTGGATGCGC GGACCCTCGT CCGGGACGGC
GGCAGCATCG TGCCCGAGCC GATGCTTGCC TATTTCACCC AGGCTTGGCC GATCGAGCTG
CGGCCGGTCG AGACCGAGCG CTATCGCGAC CGCAGCCCGA GGCCCGCGCG CTACCATGTC
TGGATGCGCG CGACGAAGCC GCTGCCGGAC GATCCGGCGG TGCACCGGGC GGTGCTGGCC
TACGCCTCGG ATATGACGCT GCTCGATTCC ACGCTGATCC CCCACGGCCG CACGGTGTTC
GACCCCGAGA TCCAGTCGGC GAGCCTCGAC CACGCCCTGT GGTTCCACCG CCCGTTCCGG
GCCGATTCCT GGCTGCTCTA TTCGCAGGAT AGCCCGAACG CGTCGGGCGC TCTGGGCTTT
GCCCGCGGCA CGTTCCACGA CGAGGAAGGG CGGCTCGTCG CCTCCGTTGC ACAGGAAGGG
CTGATCCGCT CTCGGCGCAG CTGA
|
|---|
| Protein sequence | MPDPVDALLA ILDLERLETD LFRGISPRIG WPRVFGGQVV AQALVAASRT VEAPRPPHSL
HAYFLLGGDP AVPIVYEVER IRDGGSFTTR RVKAIQKGRA IFAMSVSFHI TEEGVDHAAD
LPDVPGPGAL VDARTLVRDG GSIVPEPMLA YFTQAWPIEL RPVETERYRD RSPRPARYHV
WMRATKPLPD DPAVHRAVLA YASDMTLLDS TLIPHGRTVF DPEIQSASLD HALWFHRPFR
ADSWLLYSQD SPNASGALGF ARGTFHDEEG RLVASVAQEG LIRSRRS
|
|---|
| |