| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2042 |
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| Symbol | |
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| ID | 5835704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 2277714 |
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| End bp | 2279162 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641367840 |
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| Product | homospermidine synthase |
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| Protein accession | YP_001639509 |
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| Protein GI | 163851466 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5310] Homospermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.418846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATG GCCCGAAGAA GGATTGGCCC GTCCACGGTC GCATCACCGG CCCGATCGTG
ATGATCGGTT TCGGCTCGAT CGGCCGGGGC ACCCTGCCCC TCATCGAGCG CCATTTCGAG
TACGAAAAGA GCCGCTTCAC GGTCATTGAT CCCGTCGACA CCCATAAGGA TCTCGCCGAC
AAGCACGGCC TGCGCTTCGA GAAGGTCGCG CTCACCAAGG AAAACTACCG CGACGTCCTC
ACCCCGCTCC TCACCGAGGG CGGCGGCCAG GGCTTCTGTG TGAACCTGTC GGTGGACACC
TCCTCGCGCG ACATCCTCGA ACTCTGCCGT GAACTCGGCG CGCTCTACAT CGACACGGTC
GCCGAGCCCT GGACCGGCTT CTACTTCGAC AAGGACCTGA GCCAGGCCGA CCGCACCAAC
TACGCGCTGC GCGAGAACAT CCTCGCCGCC CGCCGCGCCG CTCCCGGCGG CACGACCGCG
GTGTCGTGCT GCGGTGCAAA CCCTGGCATG GTCTCGTGGT TCGTCAAGCA GGCGCTGCTC
AACGTCGCCC AGGACACCGG CTCCTCGACC CCTGAGCCGA AGACCCGCGA GGAATGGGCC
GCGCTCATGC GCGAACTCGG CGTCAAGGGC GTCCACATCG CCGAGCGCGA CACCCAGCGC
GCCAAGAACC CCAAGCCCCA GGGTGTGTTC GTCAACACGT GGTCGGTCGA GGGCTTCGTC
TCCGAGGGCA ACCAGCCGGC CGAACTCGGC TGGGGCACGC ACGAGACCTG GAAGCCCGCC
AATGCCCAGG AGCAGACCAA GGGCTCGCGC TGCGCGATCT TCCTGCTGCA GCCCGGCGCC
GACACCCGCG TGCGCTCCTG GACGCCGACC GCGCAGGCGC AGTTCGGCTT CCTCGTGACC
CACAACGAGG CGATCTCGAT CGCGGATTAC TACACGGTCC GCGAGGGTAA CGAGGCGGTC
TATCGCCCGA CCTGCCACTA CGCCTACCAC CCGGCCAACG ACGCCGTGCT CTCGCTGCAC
GAGATGTGGG GCAATGCCGG CAAGGTGCAG GAGCACCAGC ACATCCTCGA CGAGAACGAG
ATCGTCGACG GCATCGACGA ACTCGGCGTC CTCCTCTACG GGCATAAAAA GAACGCCTAC
TGGTACGGCT CGCAGCTCTC CATCGAGGAG ACCCGGCGGA TCGCCCCCTA CCAGAACGCG
ACCGGCCTTC AGGTGACGAG CGCCGTGCTC GCCGGCATGG TCTGGGCGCT GGAGAACCCG
GAGGCCGGCA TCGTCGAGGC CGACGAGATC GACTTCCGCC GCTGCCTGGA AGTGCAGACG
CCGTATCTCG GTCCGGTCGT GGGCGTTTAC ACCGACTGGA CCCCGCTCAC CGACCGTCCG
GGCCTGTTCC CGGAGGACAT CGACCCGAGC GACCCCTGGC AGTTCCGCAA CGTGCTCGTG
CACGGCTGA
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| Protein sequence | MSDGPKKDWP VHGRITGPIV MIGFGSIGRG TLPLIERHFE YEKSRFTVID PVDTHKDLAD
KHGLRFEKVA LTKENYRDVL TPLLTEGGGQ GFCVNLSVDT SSRDILELCR ELGALYIDTV
AEPWTGFYFD KDLSQADRTN YALRENILAA RRAAPGGTTA VSCCGANPGM VSWFVKQALL
NVAQDTGSST PEPKTREEWA ALMRELGVKG VHIAERDTQR AKNPKPQGVF VNTWSVEGFV
SEGNQPAELG WGTHETWKPA NAQEQTKGSR CAIFLLQPGA DTRVRSWTPT AQAQFGFLVT
HNEAISIADY YTVREGNEAV YRPTCHYAYH PANDAVLSLH EMWGNAGKVQ EHQHILDENE
IVDGIDELGV LLYGHKKNAY WYGSQLSIEE TRRIAPYQNA TGLQVTSAVL AGMVWALENP
EAGIVEADEI DFRRCLEVQT PYLGPVVGVY TDWTPLTDRP GLFPEDIDPS DPWQFRNVLV
HG
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