| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2023 |
|---|
| Symbol | |
|---|
| ID | 5833495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2256361 |
|---|
| End bp | 2257197 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641367823 |
|---|
| Product | 2,5-didehydrogluconate reductase |
|---|
| Protein accession | YP_001639492 |
|---|
| Protein GI | 163851449 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.760724 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCC CCGATCCCGT GCCGCAGATC GCTCTCAACG ACGGGCGGTC CATCCCCCAG
CTCGGCTTCG GCGTCTGGCG TCTGCAAGAG GCGGAGACGC CTGCCCTCGT CGGAACGGCG
CTCGGCAGCG GCTATCGCTC GATCGACACC GCCGCGGCCT ACGGCAACGA GGGCGGCGTC
GGGCGCGGCC TGCGGGAGAC GATCGTATCC CGGGCCGAGG TGTTCGTGAC GACGAAACTC
TGGAACGACG CCCAGGGCTA CGATGCGACG CGGCACGCCT TCGACGACAG CCTCGCCCGG
CTCGGCCTGG ACCATGTCGA TCTCTACCTG ATCCATTGGC CCTGCCCCGA CCGTGGACTC
TATCTCGACA GCTGGCGCGC ACTGATCCGT TTGCAGGAGG AGGGCCGCGC CGCCTCGATC
GGTGTCTCGA ACTTCACCGA GGATCAGCTC GAACGGCTCG TGAACGAGAC CGGCGTCACC
CCCGCCCTCA ACCAGATCGA GCTGCATCCG CGGTTCCAGC AGCGCAGCTT GCGCGCGGCC
CATGTCCGGC TCGGCATCGT CACGGAAGCC TGGAGCCCCC TAGGCCAGGC GCAGGTGCTG
GATGAACCCG CCATCACCCG GATCGCCGAC CGGCTCGGGC GCAGCCCGGC CCAAGTGGTT
CTGCGCTGGC ACATCGAGAA CGGCTTCGTC GCGATCCCGA AATCCGCCAC GCCCGCCCGG
ATGCACGAGA ATATCGACGT GTTCGGCTTC TCGCTCACGC AAGAGGACCA CACGGCCATC
GCCGGTCTCG ACCGGGCCGA CGGACGAATC GGGCCGGACC CAATGACGTT TCAGTAG
|
|---|
| Protein sequence | MTAPDPVPQI ALNDGRSIPQ LGFGVWRLQE AETPALVGTA LGSGYRSIDT AAAYGNEGGV
GRGLRETIVS RAEVFVTTKL WNDAQGYDAT RHAFDDSLAR LGLDHVDLYL IHWPCPDRGL
YLDSWRALIR LQEEGRAASI GVSNFTEDQL ERLVNETGVT PALNQIELHP RFQQRSLRAA
HVRLGIVTEA WSPLGQAQVL DEPAITRIAD RLGRSPAQVV LRWHIENGFV AIPKSATPAR
MHENIDVFGF SLTQEDHTAI AGLDRADGRI GPDPMTFQ
|
|---|
| |