Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2018 |
Symbol | |
ID | 5831034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 2251473 |
End bp | 2252099 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641367818 |
Product | hypothetical protein |
Protein accession | YP_001639487 |
Protein GI | 163851444 |
COG category | [S] Function unknown |
COG ID | [COG3762] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.652517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTGGTA GCGTGAGCAT CCTCGATCCT GCCGCGCGGG AGCGGATCGC CGCAGCGATC GGGCGGGCGG AGACCGGAAC ATCGGGCGAG ATCGTGGTGC TGGTCTCCGC CAGCGCCGGG CTCTATCGCT CCCCCGGCCT CGCTTTGGCC CTGGCGGTCG CCCTCGTCCT GCCCTGGCCC CTGATCCTGC TCACCGAGCT CGGTGCGGGC GAGATTGCGC TTGCTCAAGC GGCGACCGTG CTCGTCACGC TACTGCTGAC CCTGAACGAG CGTCTCCGGA TCACCCTCAC CCCCCGGCGC TGGCAGCGCG AGCGCGCTCA CGCCGCCGCC CGTCGCGAGT TCTTCGCACA CGGTCTCACC GGAACGCGGG GACGCACCGG CGTGCTGGTC TACGTGGCCC TCGCCGAACG CTACGCCGAG ATCGTTGCCG ACAAGGGTGT GCGGGCCCGC GTGGAGGAGG CGCAGTGGCG CGCCATCGTC TCGGAGCTGC TCGGTGCGGC CGGACGCGGA GCCCTCGGCG AGGGGCTCGT CTCGGCAGTG GAGGAGGTCG GCGCCGTGCT GAAGGCGGAG CTGCCGGGCA GCCACAGCGA CAACCAACTC CCCAACCGCG TCATCGTCCT CGACTGA
|
Protein sequence | MTGSVSILDP AARERIAAAI GRAETGTSGE IVVLVSASAG LYRSPGLALA LAVALVLPWP LILLTELGAG EIALAQAATV LVTLLLTLNE RLRITLTPRR WQRERAHAAA RREFFAHGLT GTRGRTGVLV YVALAERYAE IVADKGVRAR VEEAQWRAIV SELLGAAGRG ALGEGLVSAV EEVGAVLKAE LPGSHSDNQL PNRVIVLD
|
| |