Gene Mext_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2006 
Symbol 
ID5832846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2237493 
End bp2238113 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content72% 
IMG OID641367807 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_001639476 
Protein GI163851433 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.597223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA TCGACGCGCT GATGCGCTCC GTTCCCGTCA TCCCCGTGCT GGTGGTGGAG 
AATGCCGCCG ACGCGGTGCC GATCGCCGAG GCGCTGGTCG GCGGCGGGCT CACCGCCCTT
GAAGTCACGC TCCGCACCCC CGCGGCGCTC GATGTGATCC GGGCGATGTC GAGCGTCGAG
GGCGCGGTGG TCGGCGCCGG AACGGTGCTG AATGCGCGCG ACCTCGATGC CGCTATCGGC
GCAGGCGCGA AGTTCATCGT CAGCCCCGGA CTGACGACGC CGCTGACGGA AGCGGCCCTC
GCCTCGGGCG TTCCCTACCT GCCGGGCGTC GCGACCTCCG CCGACATCAT GCGCGGCCTC
GATCACGGGC TCGACCGCTT CAAGTTCTTC CCGGCGGAAG CCGCGGGCGG CCTGAAGGCG
CTGAAGGCGC TCGCCGCGCC GTTCGGACAG GTGCGCTTCT GCCCCACCGG CGGCATCACC
GAAGCGAGTG CCGGGGACTG GCTCGCCCAT CCTGCCGTGC TCTGCGTCGG CGGAAGCTGG
GTAGTCCCCG CAGGCAAACC CGATCCGGCC GCGATCCGCC GGCTCGCCGA AGCCGCCGCA
ACCTTGCGGC CCGCCCGGTA G
 
Protein sequence
MSTIDALMRS VPVIPVLVVE NAADAVPIAE ALVGGGLTAL EVTLRTPAAL DVIRAMSSVE 
GAVVGAGTVL NARDLDAAIG AGAKFIVSPG LTTPLTEAAL ASGVPYLPGV ATSADIMRGL
DHGLDRFKFF PAEAAGGLKA LKALAAPFGQ VRFCPTGGIT EASAGDWLAH PAVLCVGGSW
VVPAGKPDPA AIRRLAEAAA TLRPAR