Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2001 |
Symbol | |
ID | 5832183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 2230576 |
End bp | 2232324 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641367802 |
Product | ABC transporter related |
Protein accession | YP_001639471 |
Protein GI | 163851428 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.201401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGG CCTTCCTCGC CTATTACCGG CCGCACCGGA CGCTGTTCCT GGTGGATTTC GGCTGCGCCG TGCTCTCGGG CCTGCTCGAA CTCGGCTTCC CGCTCGCGGT CAAAGCCTTC GTCGACCGCC TGCTGCCACA GCAGGACTGG AGCCTGATCC TGCTCGCGGC AATGGGCCTG ACGCTGCTCT ACGTCGCCAA TGCCGGCCTG ATGGTGGTCG TCACCTATTG GGGCCACGTG CTCGGCATCA ACATCGAGAC CGAGATGCGC GCCCGCGCCT TCGACCACCT GCAGAAGCTC TCGTTCCGCT TCTTCGACGG GCAGAAGACC GGCCATCTGG TGGCGCGCAT CACCAAGGAT CTGGAGGAGA TCGGCGAGGT CGCCCATCAC GGGCCCGAGG ACCTGTTCAT CGCGGTGATG ACGCTGTTCG GCGCCTTCGC GCTGATGTTC CTCGTCCACC CGCCGCTGGC GCTGATGACG CTCGCGATCC TGCCGCTGAT CGCCTTCATC GTCATCCGCT ATGGCGGGCG CATGACGCGC AACTGGCAGG CGCAGTACGG GCGCGTCGGC GCCTTCAACG CCCGCATCGA GGAGAATGTC GGCGGCATCC GCGTGGTGAA GGCCTTCGCC AACGAGGCAC ATGAGCGGGC GCTGTTCGCC TCCGACAACC GGAACTACAG CACCACCAAG CTCGAAGCCT ACCGGCTGAT GGCGGGCGCC CTGTCGATCA ACTATCTCGG CCTGCGCCTC GTGCAGATCG TGGTGCTCCT CGGGGGCGCC GCCTTCGTGG TGCGCGGTGA CCTGACGCCC GGCGGCTTCG TCGGCTTCCT GCTCCTGGTG GCGGTGTTCT ACCGGCCGCT GGAAAAGATC GGGGCGGTGA TCGAGACTTA CCCGAAGGGC ATTGCCGGCT TTCGCCGCTA CCAGGACCTG CTCGCCACCG AGCCCGACAT CGCCGACCGG CCGGGCGCCG TCCCCGCCCC GCCGCTGAAG GGCGAGATCC GCTTCGAGGG CGTGCGCTTC GGCTACAGCC CGGACCGGCC GGTGCTCTCC GCGATCGACC TGACGATCCA TGCGGGCGAG ACGGTGGCCT TCGTCGGCCC CTCGGGGGCG GGCAAGACGA CGCTGCTCTC GCTGATCCCG CGTTTCTACG AGGCGGAAGC CGGACGCATC ACCATCGACG GCCACGACAT CCGCGACCTG ACGCTGGCCT CGCTGCGCGG GCAGATCGGT ATCGTCCAGC AGGACGTGTT CCTCTTCGCC GGCACGATCC GCGAGAACAT CGCCTATGGC CGGCTGCGCG CGAGCGAGGC CGAGATCCTG GACGCCGCCG CCCGTGCCCG GCTCGATGGG CTGATCGCCT CGCTGCCCGA GGGGCTCGAC ACGGTGATCG GCGAGCGCGG AGTGAAGCTC TCAGGGGGGC AGAAGCAGCG GCTCGCCATC GCCCGCGCCT TCCTCAAGAA CCCGCCGATC CTGATCCTCG ACGAGGCGAC CTCGGCGCTG GACACGCAGA CCGAGCGGGA GATCCAGGCC TCGCTATTCG AACTGGCGGA AGGCCGCACG ACGCTCGTCA TCGCCCACCG ACTCGCCACG ATCCGCCACG CCGACCGCAT CGTGGTCGTG GCCGAGAACG GCATCGTCGA GCAGGGCCGT CACGACGTGC TGCTGGCCGG AGACGGCTAC TACCGCCGCC TCCATGCGGC GCAGGTCGAG GATTCGCATC TGTCGCGGCC GCGCACGGCG GCGGAGTGA
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Protein sequence | MLKAFLAYYR PHRTLFLVDF GCAVLSGLLE LGFPLAVKAF VDRLLPQQDW SLILLAAMGL TLLYVANAGL MVVVTYWGHV LGINIETEMR ARAFDHLQKL SFRFFDGQKT GHLVARITKD LEEIGEVAHH GPEDLFIAVM TLFGAFALMF LVHPPLALMT LAILPLIAFI VIRYGGRMTR NWQAQYGRVG AFNARIEENV GGIRVVKAFA NEAHERALFA SDNRNYSTTK LEAYRLMAGA LSINYLGLRL VQIVVLLGGA AFVVRGDLTP GGFVGFLLLV AVFYRPLEKI GAVIETYPKG IAGFRRYQDL LATEPDIADR PGAVPAPPLK GEIRFEGVRF GYSPDRPVLS AIDLTIHAGE TVAFVGPSGA GKTTLLSLIP RFYEAEAGRI TIDGHDIRDL TLASLRGQIG IVQQDVFLFA GTIRENIAYG RLRASEAEIL DAAARARLDG LIASLPEGLD TVIGERGVKL SGGQKQRLAI ARAFLKNPPI LILDEATSAL DTQTEREIQA SLFELAEGRT TLVIAHRLAT IRHADRIVVV AENGIVEQGR HDVLLAGDGY YRRLHAAQVE DSHLSRPRTA AE
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