Gene Mext_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2001 
Symbol 
ID5832183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2230576 
End bp2232324 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content68% 
IMG OID641367802 
ProductABC transporter related 
Protein accessionYP_001639471 
Protein GI163851428 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.201401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGG CCTTCCTCGC CTATTACCGG CCGCACCGGA CGCTGTTCCT GGTGGATTTC 
GGCTGCGCCG TGCTCTCGGG CCTGCTCGAA CTCGGCTTCC CGCTCGCGGT CAAAGCCTTC
GTCGACCGCC TGCTGCCACA GCAGGACTGG AGCCTGATCC TGCTCGCGGC AATGGGCCTG
ACGCTGCTCT ACGTCGCCAA TGCCGGCCTG ATGGTGGTCG TCACCTATTG GGGCCACGTG
CTCGGCATCA ACATCGAGAC CGAGATGCGC GCCCGCGCCT TCGACCACCT GCAGAAGCTC
TCGTTCCGCT TCTTCGACGG GCAGAAGACC GGCCATCTGG TGGCGCGCAT CACCAAGGAT
CTGGAGGAGA TCGGCGAGGT CGCCCATCAC GGGCCCGAGG ACCTGTTCAT CGCGGTGATG
ACGCTGTTCG GCGCCTTCGC GCTGATGTTC CTCGTCCACC CGCCGCTGGC GCTGATGACG
CTCGCGATCC TGCCGCTGAT CGCCTTCATC GTCATCCGCT ATGGCGGGCG CATGACGCGC
AACTGGCAGG CGCAGTACGG GCGCGTCGGC GCCTTCAACG CCCGCATCGA GGAGAATGTC
GGCGGCATCC GCGTGGTGAA GGCCTTCGCC AACGAGGCAC ATGAGCGGGC GCTGTTCGCC
TCCGACAACC GGAACTACAG CACCACCAAG CTCGAAGCCT ACCGGCTGAT GGCGGGCGCC
CTGTCGATCA ACTATCTCGG CCTGCGCCTC GTGCAGATCG TGGTGCTCCT CGGGGGCGCC
GCCTTCGTGG TGCGCGGTGA CCTGACGCCC GGCGGCTTCG TCGGCTTCCT GCTCCTGGTG
GCGGTGTTCT ACCGGCCGCT GGAAAAGATC GGGGCGGTGA TCGAGACTTA CCCGAAGGGC
ATTGCCGGCT TTCGCCGCTA CCAGGACCTG CTCGCCACCG AGCCCGACAT CGCCGACCGG
CCGGGCGCCG TCCCCGCCCC GCCGCTGAAG GGCGAGATCC GCTTCGAGGG CGTGCGCTTC
GGCTACAGCC CGGACCGGCC GGTGCTCTCC GCGATCGACC TGACGATCCA TGCGGGCGAG
ACGGTGGCCT TCGTCGGCCC CTCGGGGGCG GGCAAGACGA CGCTGCTCTC GCTGATCCCG
CGTTTCTACG AGGCGGAAGC CGGACGCATC ACCATCGACG GCCACGACAT CCGCGACCTG
ACGCTGGCCT CGCTGCGCGG GCAGATCGGT ATCGTCCAGC AGGACGTGTT CCTCTTCGCC
GGCACGATCC GCGAGAACAT CGCCTATGGC CGGCTGCGCG CGAGCGAGGC CGAGATCCTG
GACGCCGCCG CCCGTGCCCG GCTCGATGGG CTGATCGCCT CGCTGCCCGA GGGGCTCGAC
ACGGTGATCG GCGAGCGCGG AGTGAAGCTC TCAGGGGGGC AGAAGCAGCG GCTCGCCATC
GCCCGCGCCT TCCTCAAGAA CCCGCCGATC CTGATCCTCG ACGAGGCGAC CTCGGCGCTG
GACACGCAGA CCGAGCGGGA GATCCAGGCC TCGCTATTCG AACTGGCGGA AGGCCGCACG
ACGCTCGTCA TCGCCCACCG ACTCGCCACG ATCCGCCACG CCGACCGCAT CGTGGTCGTG
GCCGAGAACG GCATCGTCGA GCAGGGCCGT CACGACGTGC TGCTGGCCGG AGACGGCTAC
TACCGCCGCC TCCATGCGGC GCAGGTCGAG GATTCGCATC TGTCGCGGCC GCGCACGGCG
GCGGAGTGA
 
Protein sequence
MLKAFLAYYR PHRTLFLVDF GCAVLSGLLE LGFPLAVKAF VDRLLPQQDW SLILLAAMGL 
TLLYVANAGL MVVVTYWGHV LGINIETEMR ARAFDHLQKL SFRFFDGQKT GHLVARITKD
LEEIGEVAHH GPEDLFIAVM TLFGAFALMF LVHPPLALMT LAILPLIAFI VIRYGGRMTR
NWQAQYGRVG AFNARIEENV GGIRVVKAFA NEAHERALFA SDNRNYSTTK LEAYRLMAGA
LSINYLGLRL VQIVVLLGGA AFVVRGDLTP GGFVGFLLLV AVFYRPLEKI GAVIETYPKG
IAGFRRYQDL LATEPDIADR PGAVPAPPLK GEIRFEGVRF GYSPDRPVLS AIDLTIHAGE
TVAFVGPSGA GKTTLLSLIP RFYEAEAGRI TIDGHDIRDL TLASLRGQIG IVQQDVFLFA
GTIRENIAYG RLRASEAEIL DAAARARLDG LIASLPEGLD TVIGERGVKL SGGQKQRLAI
ARAFLKNPPI LILDEATSAL DTQTEREIQA SLFELAEGRT TLVIAHRLAT IRHADRIVVV
AENGIVEQGR HDVLLAGDGY YRRLHAAQVE DSHLSRPRTA AE