Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1995 |
Symbol | |
ID | 5831556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2224832 |
End bp | 2225998 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641367796 |
Product | regulatory protein LuxR |
Protein accession | YP_001639465 |
Protein GI | 163851422 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCC ATTCCCACCC CTTTCCCTCC GCCATTCGCT CGGCCTCGAT CGAGCCGGCC GCCGCCCTGT CGGCCGAGGG CGCCGCCCTG ATCGACCGGA TCTACGAGGC GGCGGCCTTG CCCGAGCTGT GGCGCGATGT GCTCGTCGAA CTCGCCCGCT TCGCCGGCGC CCCGCAGGCG GTGATGATCG TCTCGACCGG GACGCACTTT CGCGACTTCG TGACGACGTC GCCGGAGTTC GACCCGTTGG TGATCGATCA TTTCGAGCGC TTCCCCGACA ACGTCCGCAT CGGACGCCTG TTGGCGCTGC GTCATCCCGG CTTTCTCAAC GACCTCGACG TCGTGACGGA GGAGGAGATC GCGACGCTGC CGCTCTATCA GGACTTCCTG ATCCCCCGGG GCTACGGCGC GGGTACCGCG ACGGCCGTGC TGGTGCCGAG CGGCGACAGC GTCATCGTCC ATTGCGAGCG CGCCCGCGCC GAGGGCGATT TCGGACCGCA GATTCTGTCC GCACTCAACA GCCTGCGTCC CCATCTCGCG CGGGCCGCCC TGCTTTCCGC ACGCCTGGAG ATGGAGCGGG TCTCGACCAC CACCCGGACG CTCGAAGCGC TCGGCCTGCC GGCGGCCGTG CTCGGAAGCG GCGGGCGGGT CATCGACGCC AATCCGTCCC TGGTGGCGAT GATGCCTCAC ACCCTCAGCG ACCAGCCCTT GCGGCTCGCC GTCGTCGATC CGGCCGCCGA CAGGCTGCTG CGCGAAGCCG TGGCACAATC CGCCTCGACG CAGGCGATGC CGGTGCGCTC GATCCCGATC GCCGCGAGCG GTGAGCGTCC CCCGGTGATC CTGCATCTCG TGCCGATCCG CGGCGCGGCC CACGACGTGT TCGTCCGCGC CCGCTTCGTG CTGATCGCGA CCCCCGTCGT GGCCCAGGAC GTGCCGAGTG CGGATGTGGT CCAGGGCCTG TTCGACCTGA CGCCGGCCGA GGCCCGGCTC GCCGCCCTGA TCGCGGCGGG CGATGCCCCG GCACCGGCCG CGGCCAAGCT CGGGATCACC CCCAGCACCG CCCGCTCGGT GCTCCGGCGC ATCTTCCAGA AGACCGGCGT GTCGCGCCAA GCCGAGCTCG TCGGCCTGCT CGCCGGCCGG GGCGCCGGGT CGGGATTGCG CGAATAG
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Protein sequence | MTIHSHPFPS AIRSASIEPA AALSAEGAAL IDRIYEAAAL PELWRDVLVE LARFAGAPQA VMIVSTGTHF RDFVTTSPEF DPLVIDHFER FPDNVRIGRL LALRHPGFLN DLDVVTEEEI ATLPLYQDFL IPRGYGAGTA TAVLVPSGDS VIVHCERARA EGDFGPQILS ALNSLRPHLA RAALLSARLE MERVSTTTRT LEALGLPAAV LGSGGRVIDA NPSLVAMMPH TLSDQPLRLA VVDPAADRLL REAVAQSAST QAMPVRSIPI AASGERPPVI LHLVPIRGAA HDVFVRARFV LIATPVVAQD VPSADVVQGL FDLTPAEARL AALIAAGDAP APAAAKLGIT PSTARSVLRR IFQKTGVSRQ AELVGLLAGR GAGSGLRE
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