Gene Mext_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1982 
Symbol 
ID5831370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2214295 
End bp2214768 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content67% 
IMG OID641367783 
Productlow molecular weight phosphotyrosine protein phosphatase 
Protein accessionYP_001639452 
Protein GI163851409 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.69026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG ACACGATCCC CGGGACCGGG CCCAAGAAGC GGCGGGTTCA GTCCGTGCTG 
TTCATGTGCA ACTTCAACGC GGTGCGCTCG CTGGCGGCGG AGGCGATCGC GCGCCATTAT
TTCGGCAAAT CTACCTACGT GCAGTCCGCC GGCGTGCGCT CGGGCGAGCC GAGCGATCCG
TTCATGGTCG CGGCCCTGGA CGAGATCGGC ATCGACGCCT CCCGCCACAA GCCGCGCACC
ATCGAGCAGT TGGAGGATTG GGAGGGGCTG AACTTCGACC TGATCATCAC CCTCTCGCCG
GAGGCGCACC ACCGGGCGCT CGAACTGACC CACACGCTTG CGGCGGATGT CGAGTACTGG
CCGACGCCGG ACCCGACGCT GGTGCAGGAG GGCACCCGCG AGCAGCGCCT CGACGGCTAC
CGCGATGTGC GCGACGGACT GACCTACCGG ATCAAGTCCC GGCTGAAGGT GTGA
 
Protein sequence
MTDDTIPGTG PKKRRVQSVL FMCNFNAVRS LAAEAIARHY FGKSTYVQSA GVRSGEPSDP 
FMVAALDEIG IDASRHKPRT IEQLEDWEGL NFDLIITLSP EAHHRALELT HTLAADVEYW
PTPDPTLVQE GTREQRLDGY RDVRDGLTYR IKSRLKV