Gene Mext_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1952 
Symbol 
ID5833789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2183698 
End bp2185080 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content68% 
IMG OID641367753 
Productethanolamine ammonia lyase large subunit 
Protein accessionYP_001639422 
Protein GI163851379 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4303] Ethanolamine ammonia-lyase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.276589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTACC GCCACACCGT TGGCCCCCGC ACCCACGTCT TCGCCGATCT GGCGACGCTG 
ATGGCGAAGG CGACACCGGT GCGCTCCGGC GATTGTCTCG CGGGCATTGC CGCGGAATCG
GCCGAGGAGA ACATGGCCGC GCGCTGGTGC CTCGCCGAGG TGCCGCTCAG GGAGATTCTG
GCCCGTCCGC TGATCCCCTA TGACGAGGAC GACGTTACCC GCCTGATCCT CGACGACCAC
GACGAGGCGG CGTTCGCCGA GATCGCCGCG CTGACGGTCG GGGATTTTCG CGAGTTTCTG
CTGACCGCGT CCTCTGAGAC GCTCGCGCGG ATCGCGCCGG GCGTGACGCC GGAGATCGCC
GCCGCGGTGT CCAAGATCAT GCGCAACCAG GATCTGATCC TGGTCGCGAA GAAGTGCCGC
GTGGTCACCC GCTTCCGCAA CACGATCGGC CTGCCCGGCA CGCTCGCGGT GCGGCTCCAG
CCCAATCACC CGACCGACGA CCCGGCGGGC GTCACCGCCT CGATCCTCGA TGGGCTCTCC
TATGGCTGCG GCGATGCCGT GATCGGCATC AACCCGGTCT CCGATTCGAT CCAGACGATG
GGCACCCTGC TGCGCCTGTT CGACGGCATC ATCGGCCGGC TGGAGATTCC GACCCAGGCC
TGCGTGCTCA CCCACGTCAC CACCACGCTC GACGCGATGA ACCGGGGCCT GCCGGTCGAT
CTGGTGTTCC AGTCGATCGC CGGGACGCAG CGGGCCAATG CGAGCTTCGG CGTCACCCTG
CCGATCCTGC AGGAGGCGCA TGAGGCGGCG CTCGCGCTCA AGCGCGGCAC GCTCGGCGAC
AACGTGATGT ATTTCGAGAC CGGCCAGGGT TCGGCCCTCT CGGCGGATGC GCATCACGGC
ATCGACCAGC AGACCCTGGA GGCGCGGGCC TATGCCGTCG CCCGCCGCTA CCGGCCGCTT
CTGGTCAACA CCGTTGTCGG CTTCATCGGG CCGGAATACC TCTACAACGG CAAGGAGATC
ATCCGCGCCG GGCTGGAAGA CCATTTCTGC GGCAAGCTGA TGGGCGTGCC GCTGGGCGTC
GACGTCTGCT ACACCAACCA CGCCGAGGCC GATCAGGACG ACATGGACAC GCTCCTGACC
CTGCTCGGGG CGGCGGGCTG CACCTACGTG ATGGGCATTC CCGGCGCCGA CGACGTGATG
CTGAACTACC AGTCCACCTC GTTCCACGAT CAGCTCTACA TCCGCGAGGT TTTGGGCCTG
AGGCGCGCGC CCGAATTCGA GGAATGGCTC GCCCGTATCG GCCTCACCGA CGCGGACGGC
GCACTCCTGC CCGGCGGGGC CGAGGCCCGC CTGCTCACCG CCGCGCCGGA GCTGGCCGCA
TGA
 
Protein sequence
MPYRHTVGPR THVFADLATL MAKATPVRSG DCLAGIAAES AEENMAARWC LAEVPLREIL 
ARPLIPYDED DVTRLILDDH DEAAFAEIAA LTVGDFREFL LTASSETLAR IAPGVTPEIA
AAVSKIMRNQ DLILVAKKCR VVTRFRNTIG LPGTLAVRLQ PNHPTDDPAG VTASILDGLS
YGCGDAVIGI NPVSDSIQTM GTLLRLFDGI IGRLEIPTQA CVLTHVTTTL DAMNRGLPVD
LVFQSIAGTQ RANASFGVTL PILQEAHEAA LALKRGTLGD NVMYFETGQG SALSADAHHG
IDQQTLEARA YAVARRYRPL LVNTVVGFIG PEYLYNGKEI IRAGLEDHFC GKLMGVPLGV
DVCYTNHAEA DQDDMDTLLT LLGAAGCTYV MGIPGADDVM LNYQSTSFHD QLYIREVLGL
RRAPEFEEWL ARIGLTDADG ALLPGGAEAR LLTAAPELAA