Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1952 |
Symbol | |
ID | 5833789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2183698 |
End bp | 2185080 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641367753 |
Product | ethanolamine ammonia lyase large subunit |
Protein accession | YP_001639422 |
Protein GI | 163851379 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4303] Ethanolamine ammonia-lyase, large subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.276589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCTACC GCCACACCGT TGGCCCCCGC ACCCACGTCT TCGCCGATCT GGCGACGCTG ATGGCGAAGG CGACACCGGT GCGCTCCGGC GATTGTCTCG CGGGCATTGC CGCGGAATCG GCCGAGGAGA ACATGGCCGC GCGCTGGTGC CTCGCCGAGG TGCCGCTCAG GGAGATTCTG GCCCGTCCGC TGATCCCCTA TGACGAGGAC GACGTTACCC GCCTGATCCT CGACGACCAC GACGAGGCGG CGTTCGCCGA GATCGCCGCG CTGACGGTCG GGGATTTTCG CGAGTTTCTG CTGACCGCGT CCTCTGAGAC GCTCGCGCGG ATCGCGCCGG GCGTGACGCC GGAGATCGCC GCCGCGGTGT CCAAGATCAT GCGCAACCAG GATCTGATCC TGGTCGCGAA GAAGTGCCGC GTGGTCACCC GCTTCCGCAA CACGATCGGC CTGCCCGGCA CGCTCGCGGT GCGGCTCCAG CCCAATCACC CGACCGACGA CCCGGCGGGC GTCACCGCCT CGATCCTCGA TGGGCTCTCC TATGGCTGCG GCGATGCCGT GATCGGCATC AACCCGGTCT CCGATTCGAT CCAGACGATG GGCACCCTGC TGCGCCTGTT CGACGGCATC ATCGGCCGGC TGGAGATTCC GACCCAGGCC TGCGTGCTCA CCCACGTCAC CACCACGCTC GACGCGATGA ACCGGGGCCT GCCGGTCGAT CTGGTGTTCC AGTCGATCGC CGGGACGCAG CGGGCCAATG CGAGCTTCGG CGTCACCCTG CCGATCCTGC AGGAGGCGCA TGAGGCGGCG CTCGCGCTCA AGCGCGGCAC GCTCGGCGAC AACGTGATGT ATTTCGAGAC CGGCCAGGGT TCGGCCCTCT CGGCGGATGC GCATCACGGC ATCGACCAGC AGACCCTGGA GGCGCGGGCC TATGCCGTCG CCCGCCGCTA CCGGCCGCTT CTGGTCAACA CCGTTGTCGG CTTCATCGGG CCGGAATACC TCTACAACGG CAAGGAGATC ATCCGCGCCG GGCTGGAAGA CCATTTCTGC GGCAAGCTGA TGGGCGTGCC GCTGGGCGTC GACGTCTGCT ACACCAACCA CGCCGAGGCC GATCAGGACG ACATGGACAC GCTCCTGACC CTGCTCGGGG CGGCGGGCTG CACCTACGTG ATGGGCATTC CCGGCGCCGA CGACGTGATG CTGAACTACC AGTCCACCTC GTTCCACGAT CAGCTCTACA TCCGCGAGGT TTTGGGCCTG AGGCGCGCGC CCGAATTCGA GGAATGGCTC GCCCGTATCG GCCTCACCGA CGCGGACGGC GCACTCCTGC CCGGCGGGGC CGAGGCCCGC CTGCTCACCG CCGCGCCGGA GCTGGCCGCA TGA
|
Protein sequence | MPYRHTVGPR THVFADLATL MAKATPVRSG DCLAGIAAES AEENMAARWC LAEVPLREIL ARPLIPYDED DVTRLILDDH DEAAFAEIAA LTVGDFREFL LTASSETLAR IAPGVTPEIA AAVSKIMRNQ DLILVAKKCR VVTRFRNTIG LPGTLAVRLQ PNHPTDDPAG VTASILDGLS YGCGDAVIGI NPVSDSIQTM GTLLRLFDGI IGRLEIPTQA CVLTHVTTTL DAMNRGLPVD LVFQSIAGTQ RANASFGVTL PILQEAHEAA LALKRGTLGD NVMYFETGQG SALSADAHHG IDQQTLEARA YAVARRYRPL LVNTVVGFIG PEYLYNGKEI IRAGLEDHFC GKLMGVPLGV DVCYTNHAEA DQDDMDTLLT LLGAAGCTYV MGIPGADDVM LNYQSTSFHD QLYIREVLGL RRAPEFEEWL ARIGLTDADG ALLPGGAEAR LLTAAPELAA
|
| |