Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1943 |
Symbol | |
ID | 5831827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2163060 |
End bp | 2164361 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641367743 |
Product | squalene-associated FAD-dependent desaturase |
Protein accession | YP_001639413 |
Protein GI | 163851370 |
COG category | [S] Function unknown |
COG ID | [COG3349] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.273475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.570646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGTA CGGTTCACGT TGTCGGCGCC GGGCTCGCCG GCCTCTCGGC GGCGGCCTCG CTGGCGGAGG CCGGCAGCCG CGTGGTGCTG CACGAAGCCG CCAAGCAGGC GGGTGGGCGC TGCCGCTCCT ACTACGACCC CTCGCTCGGG CTGACCATCG ATAACGGCAA CCACCTGCTC CTGTCGGGCA ACCGCTCGTC CCTCGACTTC ATGCGCCTCA TCGGTGCGCC GGCCAACGCC CTGACCGGGC CGGACGAGGC GGTCTATGAC TTCGCCGACA TTCGTACCGG CGAGCGCTGG ACCCTGCGCC CGAACGAGGG CCGTTTGCCG TGGTGGGTGC TGCGGGCCGG CCGGCGCGTG CCAGGCACCC GCGCGCGCGA CTACCTCGCG CCGGTCTCCC TGCTGATGGC CGCCTCCGGC AACAAGCCGG GCCAGAGCGG CACGATCGGC GAGAAGATGT CCTGCGAGGG GCCGCTCTAC GAGCGGCTCT GGCACCCGGT CCTGCTCGCT GCGCTCAACA CCGAGCCGCG CGAGAGCGAT GTCGGGCTCG CTGCCACCAT CCTGCGCGAG ACCTTCGGGG GGGGCGGGCG TGCCTGTCGG CCGCTCATCG CCGTCGAGGG CCTGTCCACC GCCTTCGTCG ATCCGGCCCT GCGCTACCTC CAGAGCCGCG GCGCCGAGAT CCGCTACGGC CGGCGGCTGC GAGCGCTGAC GCTCGGCCAG GGCCGCATCG AGCGCCTGGA CTTCACCGAC GAGCCGACGG TGATCGGTCC CGACGACGCG GTGGTCATGG CTCTGCCGCC TTGGGTGGCG AGTGAACTCC TGCCCGGCAC GCCCGCGCCG CAGGAATTCC GCTCGATCGT CAACGCGCAT TTCGCCGTGC GCCCGCCCGA GGGCGCTCCG CTGATGCTCG GCGTCGTCGG CGGCCTGACC GAGTGGCTGT TCGCCTACCC GGACCGCTTC TCCGTCACCA TCAGCGGCGC CGACCGGCTG CTGGAGGAGG GCCGCGAGGA TCTCGCGCGC CGCATCTGGA CCGAGATCGC AGATCTCAAC GGTCTTGCAC GGGATTTGCC CAACTGGCAG ATCGTCAAGG AAAAGCGTGC GACGTTCGCG GCCACGCCCG CGGAAGCTGC GCGCCGCCCC GGCGCGGCGA CGCGCTACCG GAATCTGGTT CTCGCCGGTG ATTGGACGGA GACGGGGCTG CCCTCGACCA TCGAGGGCGC GATCCGATCC GGCGCAAACG CCGCGCAAGC CCTGTTCCGC ACCGGGATGT GCGGACGGGC ACAGGCACAG GGAGTCGCTT GA
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Protein sequence | MTGTVHVVGA GLAGLSAAAS LAEAGSRVVL HEAAKQAGGR CRSYYDPSLG LTIDNGNHLL LSGNRSSLDF MRLIGAPANA LTGPDEAVYD FADIRTGERW TLRPNEGRLP WWVLRAGRRV PGTRARDYLA PVSLLMAASG NKPGQSGTIG EKMSCEGPLY ERLWHPVLLA ALNTEPRESD VGLAATILRE TFGGGGRACR PLIAVEGLST AFVDPALRYL QSRGAEIRYG RRLRALTLGQ GRIERLDFTD EPTVIGPDDA VVMALPPWVA SELLPGTPAP QEFRSIVNAH FAVRPPEGAP LMLGVVGGLT EWLFAYPDRF SVTISGADRL LEEGREDLAR RIWTEIADLN GLARDLPNWQ IVKEKRATFA ATPAEAARRP GAATRYRNLV LAGDWTETGL PSTIEGAIRS GANAAQALFR TGMCGRAQAQ GVA
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