| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1926 |
|---|
| Symbol | |
|---|
| ID | 5833088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2143504 |
|---|
| End bp | 2144868 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641367726 |
|---|
| Product | ATPase domain-containing protein |
|---|
| Protein accession | YP_001639396 |
|---|
| Protein GI | 163851353 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.82384 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCC CAGGCCTCTG GATGGAACCG CCCGCCGAAC CGCAGACGAT CGAGGCCCTG
ACGCATCGGG TGGCCAAGCT CGAGCGCATC AACGCGGCGC TGATGGCCCA TGTCGAGCGC
ACCATGGATC AGCAGGGCGG CGCTTACTCG CTGTTCCAGA CCGCGATCAT GCTGGAGGGC
CGCGTCCGCG CCCGCACCGA AGAGCTGACC GCGCTGATGA ACAGCCTGGA GCGCTCGAAC
GCGGCGATGC AGGCCGCCAA GGAAGAGGCC GAGACCGCCA ACCGCTCGAA GACGCGCTTC
CTGGCCGCGG CCAGCCACGA TCTGCTCCAA CCGCTCAACG CCGCCCGCCT CTCGCTCTCG
GCGCTGACCG ACCTCGCGCC GGGGCCGGAA GCGCAGGGGA TCGCCCGGCA GGTCGAGCGC
GGCCTGGAGA CGATCGAAGA CCTGATCAAG GCGCTCATCG ACATCTCGAA GCTCGATGCC
GGCATCGTGC GCCCCGTGAT CAAGCCGGTG CGGCTCGCCG ATCTCGTGGC CGGGATCGAG
GCCAGCTTCC GGCCCTTCGC CGAGCGCAAG GAGCTGCGCC TCGTCACCCG CTGCGCCGAC
CTCGTGGTGG AGACCGACGG GATCCTGCTC CAGCGCATCC TTCAGAACCT CGTCTCGAAC
GCGATCCGCT ACACCGAGAG CGGCGGCGTG CTGATCGCAG CGCGTCGGCG GGACAAGCTC
TGCCGGATCG ACGTGGTCGA TACCGGCTGC GGCATACCCG AGGCTGAGCG GGCCCTGGTC
TTCGAGGAGT TCTTTCGCGG CGCGCGCGAG TGCGACGATG GCGGGATCGG CCTCGGGCTC
GGCCTGTCGA TCGTGCAGCG CATGGCCTCG ACCCTGGGGC ATGCCATCGA ACTGCATTCC
CGCAGTGGTC ACGGCACACG GCTGAGCCTC ACCCTGCCGC TCGCCACCCA GCGTCCGGAT
CCGCGGGTGA CCCTCGCTCC CTTGGCGACG GCGCTGACGG GCGCGCGGGT TCTGGCGATC
GAGAACGACG CCTCCACGGC GGAGGCGCTG CAGCGGCTCC TGCGCAACTG GGATGCCGAG
GTGCAGGTGT TTCGCGATCT CGCGGGCGTC GTGGCTGCCC TCGGTGCCGG TCTGGCACGG
CCGGATGTGA TGGTGATCGA CTATCACCTC GACAACGGCG CCTGCGGCCT CGACGTGGTG
GATTACCTGC GGCGCAACCG GGGCTGGGTG ACGCCGGTGA TCCTCACCAC CGCCGACCAC
GGCGCCGACA TCGCCGCCCG CGCCCAGGCC ACCGGGGCCG AACTCGTCCA CAAGCCGATC
AAGCCGGCGC AACTGCGCTC GCTGCTCGCC TACATGCTGG CGTGA
|
|---|
| Protein sequence | MNRPGLWMEP PAEPQTIEAL THRVAKLERI NAALMAHVER TMDQQGGAYS LFQTAIMLEG
RVRARTEELT ALMNSLERSN AAMQAAKEEA ETANRSKTRF LAAASHDLLQ PLNAARLSLS
ALTDLAPGPE AQGIARQVER GLETIEDLIK ALIDISKLDA GIVRPVIKPV RLADLVAGIE
ASFRPFAERK ELRLVTRCAD LVVETDGILL QRILQNLVSN AIRYTESGGV LIAARRRDKL
CRIDVVDTGC GIPEAERALV FEEFFRGARE CDDGGIGLGL GLSIVQRMAS TLGHAIELHS
RSGHGTRLSL TLPLATQRPD PRVTLAPLAT ALTGARVLAI ENDASTAEAL QRLLRNWDAE
VQVFRDLAGV VAALGAGLAR PDVMVIDYHL DNGACGLDVV DYLRRNRGWV TPVILTTADH
GADIAARAQA TGAELVHKPI KPAQLRSLLA YMLA
|
|---|
| |