| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1894 |
|---|
| Symbol | |
|---|
| ID | 5833535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2115151 |
|---|
| End bp | 2116314 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641367694 |
|---|
| Product | PAS sensor protein |
|---|
| Protein accession | YP_001639364 |
|---|
| Protein GI | 163851321 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.383857 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAT TTCAGCAGGA TCTTTCTGGG ACCCCAGCAC GCACCCTCGC CGAACGGCAT
ATCGAGGCGA TCCGCCAGCA CGGCGGGATC TTTGTCGATG CGGTGCGGCT CACCCGGATG
CCGATGATCG TCACCGACGC CACCCTACCG GGCAACCCGA TCATCTTTGC CAATCAGGCC
TTTGCGGAGT TGTCGGGCTA CTCACTGGAG GACCTGCTCG GGCAGGATCC GCACTTCATG
AACGGCCCGG AGACTGATCC GGCGACGGTC CAGGAGTACG AGGCGGCAAT CCGCGAGAGC
CGCAACGCGA CGCTGGAAAT CCTGCAGTAC TGTAAGGACG GCAAGCCGTT CCGGGCGATG
CTGTTTGCTA GCCCCCTCGA TGACGGGCAG GGCACGGTCA CCAACCACTT CCTGTCGTAC
CTCGATATCA CCCGTCGCGT TGAGGCCGAG AAGGACCTGC AGGAACTGAC CGCTGCGCTG
GAGCAGCGCG TGGCCGACCG GACCCGCGAA CTGGAAGCGG TGAACGAGCG ACTGACGAAG
CTGGCCGCCG AGCGCGAGAT GTTGCTGGTC GAGGTCAACC ACCGGGCCAA GAACAGCCTG
TCGATCGCTG GAGCGCTCTT AAGCCTGCAA GGGCGCCGCC AAGCCGATCC AGCTGTCAAA
GCGCTGTTCG CCGAGACCCA GGAGCGGCTC AATGCCATGG CACGTGCGCA CGATCTGCTG
AGCAGGTCGG ACCATGTTCA GCAGGTTAAT GCCGGCGGCT ACGTGGCTGA CCTCTGTGCG
GCCTTGGAGG CACTGACCGA AAGCGATGAT CGCATCCAGC TGGAGGCGCA GGTGGAAGAG
GGGATCTTTG TCAGCGCCGA CCGGGCTATT CCCCTGGGCT TGGCACTCAC CGAGCTGGTG
ACCAACGCGG TCAAGTACGC GTTCCCGCCC CCACGCTCCG GCACGATCCG CGCCCAGGTC
CGGCGGTCGC AGCCCGGTCG GGTCGAGCTG GTGATCCAGG ACAATGGAGT TGGTATGGCA
GGCGTGCGGG AGGGCTCGCT CGGCTACAGC CTTATTCGCT CGCTGGTGCA GCAGATCGAG
GGCGACATCG ACATCCGCAG CGACGCCGGC GTGATCGTAA CGATCTCGTT CCCCGATCTG
CCGCCACACG GCGGGGCGGG TTAG
|
|---|
| Protein sequence | MNEFQQDLSG TPARTLAERH IEAIRQHGGI FVDAVRLTRM PMIVTDATLP GNPIIFANQA
FAELSGYSLE DLLGQDPHFM NGPETDPATV QEYEAAIRES RNATLEILQY CKDGKPFRAM
LFASPLDDGQ GTVTNHFLSY LDITRRVEAE KDLQELTAAL EQRVADRTRE LEAVNERLTK
LAAEREMLLV EVNHRAKNSL SIAGALLSLQ GRRQADPAVK ALFAETQERL NAMARAHDLL
SRSDHVQQVN AGGYVADLCA ALEALTESDD RIQLEAQVEE GIFVSADRAI PLGLALTELV
TNAVKYAFPP PRSGTIRAQV RRSQPGRVEL VIQDNGVGMA GVREGSLGYS LIRSLVQQIE
GDIDIRSDAG VIVTISFPDL PPHGGAG
|
|---|
| |