Gene Mext_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1887 
Symbol 
ID5832970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2107178 
End bp2107627 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID641367687 
Producthypothetical protein 
Protein accessionYP_001639357 
Protein GI163851314 
COG category[S] Function unknown 
COG ID[COG5478] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.645116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCAT CGCGCGCGTT CACCGCCTTT GCCGGCAAGG TCGCCAAGTG GGCCGGGCAC 
CCTCTCGCCT TCGCGCCGGG TACTGCCATC GTCGTCGGCT GGGCCGTCAG TGGTCCGTTC
TTCGGCTACT CGGAGACCTG GCAGCTCGTC ATCAACACCG GCACTACCAT CGTGACCTTC
CTGATGGTGT TCCTGATCCA GAGCTCGCAG AACCGGGACG GGGCGGCCAT CCAGGCCAAG
CTCGACGAGC TCATCCGAGC CAGCGCTGCC CAGAACCGCT ACATCGGCAT CGAGCACCTC
ACCGAGGCGG AACTCGACGA ATTCAGGCAG CGCTGCGAGA CGCGCGCCAA GGCGGAGCGC
CTGGACGACG TCAGGGAAGC CGCCGACCAA GCCGAAGTCC GTGCCCGCGA GAAGGCGGCA
CGCGCGGCGT CCAGGGCGGC AGGAGGTTGA
 
Protein sequence
MPASRAFTAF AGKVAKWAGH PLAFAPGTAI VVGWAVSGPF FGYSETWQLV INTGTTIVTF 
LMVFLIQSSQ NRDGAAIQAK LDELIRASAA QNRYIGIEHL TEAELDEFRQ RCETRAKAER
LDDVREAADQ AEVRAREKAA RAASRAAGG