Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1881 |
Symbol | |
ID | 5831596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2100534 |
End bp | 2103152 |
Gene Length | 2619 bp |
Protein Length | 872 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641367681 |
Product | PAS sensor protein |
Protein accession | YP_001639351 |
Protein GI | 163851308 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTGGT CCGACGATCC TCTCGACAGT GTACCGAAGC AAAGCTTCGA CGATGTCGTG CGTCTGGCTG CCGAGCTCTG TCAGGCTGCG CATGCGGTGA CCTGTTTGCA GGCGGGAGGG CGCCTGCAAG TGCATGCCTC CTACAGTGCT GCCAGTGCCT CGACGGCGTT GGATCCGGAC GTGTGCGCCG ATGCTGCCGT GACGGATGAG CTGCTCATCG TCCCGGACCT GCACGAGGGC CCGGAGCGGA TGGGCTGTCC GCGGCTTACG GAGGGCTCAC AGATGCGCTT CTATGCGGCC GTACGCCTGC AAGCGGCGGA TGGCACGGTG CTGGGCGTTC TATGCGTGCT GGATCCTCTG CCGCGCCGGA AGGGCCTGAC CCCAGCCCAG CAGGAATGTC TACGGAGCCT TGCCCGTCAG ACCGTTACGC TTCTTGAGGT GCGACGCGCA GCTCGGGTGC ATCGTACCCA GCGGATCCTG CACGAGCGCA TCCTCGACAG CGCGACGGAT TACGCGATTA TCGCGACGGA CGGTGCCGGC CGGATCACCC GCTGGAATGC AGGAGCCGAG CAGATCCTCG GCTGGCGCGA AGAGGAGATG CTGGGCGAGC CCACCCAGCT GTTCTTCACG CCTGAGGACC GGGAAGCTGG GCGACTCAAG ACCGAGATGG CGCTGGCACT GAAAGACGGC AGTGCGCCGG ATGAGCGCTG GCACCTGCGC AAGGGCGGGG AGCGGTTCTG GGCTAGCAGC GAGCTCATGC CGTTGAGGGC TGAGAATGGC TCCGTGCAGG GGTTCCTGAA GATCCTGCGC GATCGTACCC AGCAGCGCGT CGAAGCAGCC GAGCGCAACT CCAGTGAGCT GCGCTTCCGC TCGCTCGTCG AGGTCAGCCC GCAGGTGGTG TGGTTCGGCG ACGCCGCCGG CAACATCACC TACTGCAATC CTATGTGGTG CGAGTACACT GGACTAACGC TAGGCGACAC AAGCGGGGCG GACTGGGCCA GCGTGATCCA TCCAGACCAG CAGGAGCGTG TGCTGGAGGT CTGGAGGCAT GCGGTTGAGA CCGGAGGATC CTACGAGGTC GAGATCCCGT TCCGCCGTGC CAGCGATGGC CAGTACCGCT GGTTCCTCGC ACGGGGCAGG CCTGTGCGCG ATGCGGCCGG CCTGCTGGAA AGCTGGATCG GCATCGCCAT CGACATCCAC GACCGCAAGG AGGCTGAGGT AGCGCTCCGC AGCGCGCAGG AGCAGTTGCG CCTTGCCGTC GAGGCGACCG AGACGGGCGT GTTCGACTAC GACCTAGTTG CAGACGAGCT GAAGTGGGAC ACTCGCATCC GCTCCTTCTA CGGCCTGGCG CCGGACGCCC CCGTCGACCT GTCCGTCCAC TTGGCCTGCG TGCACCCGGA CGACCACGAA CGAGCGGACA AGGCGGTCGC CGCTGCCGTC GATCCGGACG GCGCCGGCAT CTACGACATC ACCTATCGCA CGGTCGCCCC AGAGGACGGC ACTGAACGCT GGGTGTCCGC CAAGGGTCAG ACCCTGTTCG AGGACGGGCG TCCCATACGC CTCATCGGCA CTGCGCGCGA GGTCACCGAG AGCCGGCGGG CCGAGCAGGC CCTGCGCGAG ACCGAGGAAC GCTACCGGCT GGCCTCGCGG GCCACCAACG ATGCGATCTG GGACTGGAAC CTTGCCACCA ACCACGTGCT CTGGAACGAG GCGCTGAGGG TGGCTCACGG CTATACGCCC GATGCCGTCG AGCCGACCGG TGACTGGTGG ATCGGCCACA TTCACCCCGA CGACCGCGCC CGCATCGATG CCTCCATCCA TGCCATCATC GATGGGACGG GTACCGCCTG GAGCGATGAG TACCGGTTCC TGCGGGCAGA CGGCTCCTAC GCCGACATCC TCGACCGCGG CTACGTTATC CGCGACGCTC AGGGGAAGGC GACCCGCATG ATCGGGGCGA TGCTGGATAT CAGCGAGCGT AAGCGGGCTG AGGAGCACCA GCGCCTGCTT ACGGGCGAGC TGCAGCACCG GGTCAAGAAC ACCCTGGCGA TGGTCCAGGC GATTGCCAGC CAGACCCTTC GAGGTGCCAC CGACCTCAAC GACGCCCGCG AGGCCTTTGC CGCCCGCCTG ATCTCGCTCG GCCGCGCGCA TGACATCCTG ACCCAGGCGA GCTGGACGGC CGCCCCGATC CTGCAGGTGG TTCAGGGCGC ACTCAGCGTG CACGCCCAGG TGGGTGCCGG GCGGATCCGC ATCAGCGGGC CCGACGTGCT GCTCGGCGCG AAACCTGCAC TCTCCCTCGC GCTGGCCCTG CACGAACTGG CCACCAACGC GGCCAAGTAC GGCGCGCTCT CGAACGAGAC CGGGGTGGTC GACCTGCGCT GGCACGTGGT GCATGAGGAC GAAGCGCTGC GGTTCTACCT CACCTGGTCC GAGCAGGGCG GTCCACCCAT TCTCGTCCAG CCCGCCCGCC GTGGGTTCGG CTCACGCCTG ATCGAGCGCA GCTTCGCCGC TGAAGTTGGC GGCGAGGTCA AGCTCACCTA CGCGCCGACC GGTCTGGTCT GCCGTCTGGA GGTGCCCCTT GCCTTGATGC AGGAGCAGCG CAGCGAGATC GCAGCGTAA
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Protein sequence | MPWSDDPLDS VPKQSFDDVV RLAAELCQAA HAVTCLQAGG RLQVHASYSA ASASTALDPD VCADAAVTDE LLIVPDLHEG PERMGCPRLT EGSQMRFYAA VRLQAADGTV LGVLCVLDPL PRRKGLTPAQ QECLRSLARQ TVTLLEVRRA ARVHRTQRIL HERILDSATD YAIIATDGAG RITRWNAGAE QILGWREEEM LGEPTQLFFT PEDREAGRLK TEMALALKDG SAPDERWHLR KGGERFWASS ELMPLRAENG SVQGFLKILR DRTQQRVEAA ERNSSELRFR SLVEVSPQVV WFGDAAGNIT YCNPMWCEYT GLTLGDTSGA DWASVIHPDQ QERVLEVWRH AVETGGSYEV EIPFRRASDG QYRWFLARGR PVRDAAGLLE SWIGIAIDIH DRKEAEVALR SAQEQLRLAV EATETGVFDY DLVADELKWD TRIRSFYGLA PDAPVDLSVH LACVHPDDHE RADKAVAAAV DPDGAGIYDI TYRTVAPEDG TERWVSAKGQ TLFEDGRPIR LIGTAREVTE SRRAEQALRE TEERYRLASR ATNDAIWDWN LATNHVLWNE ALRVAHGYTP DAVEPTGDWW IGHIHPDDRA RIDASIHAII DGTGTAWSDE YRFLRADGSY ADILDRGYVI RDAQGKATRM IGAMLDISER KRAEEHQRLL TGELQHRVKN TLAMVQAIAS QTLRGATDLN DAREAFAARL ISLGRAHDIL TQASWTAAPI LQVVQGALSV HAQVGAGRIR ISGPDVLLGA KPALSLALAL HELATNAAKY GALSNETGVV DLRWHVVHED EALRFYLTWS EQGGPPILVQ PARRGFGSRL IERSFAAEVG GEVKLTYAPT GLVCRLEVPL ALMQEQRSEI AA
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