Gene Mext_1865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1865 
Symbol 
ID5831501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2087401 
End bp2088867 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content45% 
IMG OID641367665 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_001639335 
Protein GI163851292 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACAAGCT TGGAGGAAAA GCTTGATAGC TTCGGCTATA CCGCAGTAAT CATTCGTGTC 
ACAGATTTAT TTTCTCTGCT CCAGGACCAG CTCTCTCTTC CGGTTGATCT TGAAAACACG
CCATTGGAAG ATCGATATAG ATCATACATC AGATACGGCG ATGCGTTGAG GGAGCACTTC
GACGACGACT CCTTCCTGGC TTCTCTGTCA ATCGCCAAGA TTATTAACGC CCGAAGAAAA
ATTGTCGCCG AAAAGGATTT AGAGAACCCG CAGAAAATAG CTTATATTAT TAGGCAGTTT
AAGAGAAGAG AAGAGGTTGA GTTAGTCCGA TCTGTATACG GTCCTCTATT TTTTCAGATA
TCAGTTTACT CTAAGCGCAG CAGTCGAGTT GATAATTTAG CGCGGAAAAT CGCAGCTTCT
CACAATTCTG CTGATTTGAT CCGCTATCGC GATGCTGCAG AACAATTAGT TCGTATCGAT
GAAAATGAAA TTGAAGACCG GCACGGTCAA AGGGTAAGTG ATGTCTTTCA TGAGGCGGAC
TATATAGTTA ATGTTGATGT CAATAAAGAT AGTGTAGACA ATAAGGAAAC AGTGAACTCC
CAGGTTGGGA GGTTCATTGA CCTAGTATTT GGATCAAATT CCATATCTCC TAGCAAGTCG
GAATATGGCC TTTACACCGC GAAATCTGCA TCGCTCCGTG CAATCGATCT GTCAAGACAG
GTTGGTGCTG CGATATTTAC GCCCGACGGC GAAATCATAT CCCTCGGAGC GAATGAAGTT
CCCAAGTCTG GCGGCGGCAC TTATTGGTCG GACGACAAAT TCGACGATAG AGACTACAAA
AGAAATCAAG ACTCAAATGA GAAGAGAAAG AGGGAACTAT TATCTGAGTT GGTCGAAATA
ATGTTCGATA AAGATGAGCG CGAAGGGGCC CTCCAAAACC TGGCTGTCCG AAAGTCGCAA
TTTATGGACG CGCTTGAGTA TGGTAGAATT ATTCACGCTG AAATGTCTGC TTTGTGTGAC
GCGGCGAGGT TGGGGCGGCC TTTAAAATCT TCACGACTCT ATTGCACTAC GTTCCCTTGT
CATATGTGTG CCAAGCACAT AGTGGCGGCC GGTGTCGAGG AAGTGGTATT CCTCGAGCCT
TACCCAAAAA GTTTGGCCAG CGATCTCCAC GGCGACTCGA TCGATATTGA AGGTCAGACG
CGCGGAGAGT ACGAGCATTT TCCCGCCACT AAATTCCGGC ATTTTCACGG TGTGTCTCCT
AAGCGATATC GTGATTTATT TGAATCAAAA AGAAGAAAGG ATGAAGGAGG GGCATTTCAA
AGATGGAGAG GGGGGAGAAG GCAGGCCATA GTAGACATAA AGCTTCCAGT ATATTTGAAT
TTAGAAGAGT ATATAATGCA AGCTGTAGTA ATTACATCGC TTAATAAGGC TTCGGTTTCT
CTAGAGGTCC TATCTCATCA TGGATAA
 
Protein sequence
MTSLEEKLDS FGYTAVIIRV TDLFSLLQDQ LSLPVDLENT PLEDRYRSYI RYGDALREHF 
DDDSFLASLS IAKIINARRK IVAEKDLENP QKIAYIIRQF KRREEVELVR SVYGPLFFQI
SVYSKRSSRV DNLARKIAAS HNSADLIRYR DAAEQLVRID ENEIEDRHGQ RVSDVFHEAD
YIVNVDVNKD SVDNKETVNS QVGRFIDLVF GSNSISPSKS EYGLYTAKSA SLRAIDLSRQ
VGAAIFTPDG EIISLGANEV PKSGGGTYWS DDKFDDRDYK RNQDSNEKRK RELLSELVEI
MFDKDEREGA LQNLAVRKSQ FMDALEYGRI IHAEMSALCD AARLGRPLKS SRLYCTTFPC
HMCAKHIVAA GVEEVVFLEP YPKSLASDLH GDSIDIEGQT RGEYEHFPAT KFRHFHGVSP
KRYRDLFESK RRKDEGGAFQ RWRGGRRQAI VDIKLPVYLN LEEYIMQAVV ITSLNKASVS
LEVLSHHG