Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1865 |
Symbol | |
ID | 5831501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2087401 |
End bp | 2088867 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641367665 |
Product | CMP/dCMP deaminase zinc-binding |
Protein accession | YP_001639335 |
Protein GI | 163851292 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2131] Deoxycytidylate deaminase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACAAGCT TGGAGGAAAA GCTTGATAGC TTCGGCTATA CCGCAGTAAT CATTCGTGTC ACAGATTTAT TTTCTCTGCT CCAGGACCAG CTCTCTCTTC CGGTTGATCT TGAAAACACG CCATTGGAAG ATCGATATAG ATCATACATC AGATACGGCG ATGCGTTGAG GGAGCACTTC GACGACGACT CCTTCCTGGC TTCTCTGTCA ATCGCCAAGA TTATTAACGC CCGAAGAAAA ATTGTCGCCG AAAAGGATTT AGAGAACCCG CAGAAAATAG CTTATATTAT TAGGCAGTTT AAGAGAAGAG AAGAGGTTGA GTTAGTCCGA TCTGTATACG GTCCTCTATT TTTTCAGATA TCAGTTTACT CTAAGCGCAG CAGTCGAGTT GATAATTTAG CGCGGAAAAT CGCAGCTTCT CACAATTCTG CTGATTTGAT CCGCTATCGC GATGCTGCAG AACAATTAGT TCGTATCGAT GAAAATGAAA TTGAAGACCG GCACGGTCAA AGGGTAAGTG ATGTCTTTCA TGAGGCGGAC TATATAGTTA ATGTTGATGT CAATAAAGAT AGTGTAGACA ATAAGGAAAC AGTGAACTCC CAGGTTGGGA GGTTCATTGA CCTAGTATTT GGATCAAATT CCATATCTCC TAGCAAGTCG GAATATGGCC TTTACACCGC GAAATCTGCA TCGCTCCGTG CAATCGATCT GTCAAGACAG GTTGGTGCTG CGATATTTAC GCCCGACGGC GAAATCATAT CCCTCGGAGC GAATGAAGTT CCCAAGTCTG GCGGCGGCAC TTATTGGTCG GACGACAAAT TCGACGATAG AGACTACAAA AGAAATCAAG ACTCAAATGA GAAGAGAAAG AGGGAACTAT TATCTGAGTT GGTCGAAATA ATGTTCGATA AAGATGAGCG CGAAGGGGCC CTCCAAAACC TGGCTGTCCG AAAGTCGCAA TTTATGGACG CGCTTGAGTA TGGTAGAATT ATTCACGCTG AAATGTCTGC TTTGTGTGAC GCGGCGAGGT TGGGGCGGCC TTTAAAATCT TCACGACTCT ATTGCACTAC GTTCCCTTGT CATATGTGTG CCAAGCACAT AGTGGCGGCC GGTGTCGAGG AAGTGGTATT CCTCGAGCCT TACCCAAAAA GTTTGGCCAG CGATCTCCAC GGCGACTCGA TCGATATTGA AGGTCAGACG CGCGGAGAGT ACGAGCATTT TCCCGCCACT AAATTCCGGC ATTTTCACGG TGTGTCTCCT AAGCGATATC GTGATTTATT TGAATCAAAA AGAAGAAAGG ATGAAGGAGG GGCATTTCAA AGATGGAGAG GGGGGAGAAG GCAGGCCATA GTAGACATAA AGCTTCCAGT ATATTTGAAT TTAGAAGAGT ATATAATGCA AGCTGTAGTA ATTACATCGC TTAATAAGGC TTCGGTTTCT CTAGAGGTCC TATCTCATCA TGGATAA
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Protein sequence | MTSLEEKLDS FGYTAVIIRV TDLFSLLQDQ LSLPVDLENT PLEDRYRSYI RYGDALREHF DDDSFLASLS IAKIINARRK IVAEKDLENP QKIAYIIRQF KRREEVELVR SVYGPLFFQI SVYSKRSSRV DNLARKIAAS HNSADLIRYR DAAEQLVRID ENEIEDRHGQ RVSDVFHEAD YIVNVDVNKD SVDNKETVNS QVGRFIDLVF GSNSISPSKS EYGLYTAKSA SLRAIDLSRQ VGAAIFTPDG EIISLGANEV PKSGGGTYWS DDKFDDRDYK RNQDSNEKRK RELLSELVEI MFDKDEREGA LQNLAVRKSQ FMDALEYGRI IHAEMSALCD AARLGRPLKS SRLYCTTFPC HMCAKHIVAA GVEEVVFLEP YPKSLASDLH GDSIDIEGQT RGEYEHFPAT KFRHFHGVSP KRYRDLFESK RRKDEGGAFQ RWRGGRRQAI VDIKLPVYLN LEEYIMQAVV ITSLNKASVS LEVLSHHG
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