Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1864 |
Symbol | |
ID | 5832647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2085744 |
End bp | 2087033 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641367664 |
Product | integrase family protein |
Protein accession | YP_001639334 |
Protein GI | 163851291 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAGC TGACGAAGCG CATCTTGGAT GCGGCAGGAG CCCGTCCGAC CCCATACTTC CTCTGGTGCA GCGATCTGAA AGGGTTCGGT GTCCGCATCT TTCCGAGTGG GCGGCGGGTC TACTACGCCG ACTATCGAAC CGCAGCCGGT ATGCGCAGAC GCATGTCGCT GGGCGAGCAC GGCAAGCTCA CGGTAGACGA GGCGCGCCGA CTGGCCATCA CCACGCTCGG CGACGTGATC CGCGGTGACG ATCCGATCGA GGAGCGTGTC ACTCGGCGTA AGTCGCTGAC GATCGCCGAA CTGTGCCGAC GGTACCTTGA AGCAGCCGGA GCTGGCTTGG TGCTCGGCCG CGGCCGGAAG CCGAAGAAGG CTACGACGCT GGTCTCCGAC CGCGGGCGTA TCGAACACCA CATCGTCCCG CTGCTCGGCT CGCGATTGGT TCGTGATCTG ACCACGGCCG AGGTTCAGCG CTTCGTGCGC GACGTCCAGG CTGGTCGGAC GGCCAAGAGG TACAAGACCA AGGCTCGTGG CATGGTCTTG GTCGAGGGAG GCGCTGGCGC GGCAGCACGC ACGGCTGGCT TGCTTGGCGG CATAATGAGC TACGCGATCG GGGAGGGCGT CATTGCCCTG AACCCAGTGC GTGGCGTGAA ACGGCCGGCC GACAGGAAGA AGGACCGACG CCTCTCACCA GAGGAGTACC GCGCGCTCGG CCGGGTGCTC GCCGAGGCGG AAGGGGACCG CGAGAGCTGG CAGGCCGTGA GCAGCATCCA GTTGCTCTGT CTCACCGGAT GCCGCATGCG GGAGATCGCC AACCTGCGTT GGACCGAGGT AGATTTTGCC GGTCGCTGCC TCCGCCTCGA CAATACGAAG GAAGGGCGCT CAATCCGGCC GCTCGGTCAA GCCGCGGTCG CACTGCTCCG CCAGATCGAG GAGCGTCGCG CTGGTCCCTA CGTGTTGCCT GCGACGCGCG GGGAGGGCGG GTTCGGCGGT ATCCCGGACG CAATCGAAAG ATACTCCAAA CGCGCTGGCC TCCCAGGCAT TGGCGCTCAC ACCTTGCGCC ATTCATTCGC CTCCACCGCG GCAGACCTTG GCTGCAGCGA CTCGACGATT GGAGCGATGC TCGGCCACGC CGGGCACGGT GTAACCTCGC GGTACATCCA TCACCTCGAC GCAGTGCTGA TCATGGCGGC GGATCGAGTC ACGACTGCGA TGGCAGGGTG GCTCAAGGAT CGATATGCAG AGAGGCTAGA GCCGGCCTAT CCCGCCAGCA GGACTGTACC GCTTAGCTAG
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Protein sequence | MPKLTKRILD AAGARPTPYF LWCSDLKGFG VRIFPSGRRV YYADYRTAAG MRRRMSLGEH GKLTVDEARR LAITTLGDVI RGDDPIEERV TRRKSLTIAE LCRRYLEAAG AGLVLGRGRK PKKATTLVSD RGRIEHHIVP LLGSRLVRDL TTAEVQRFVR DVQAGRTAKR YKTKARGMVL VEGGAGAAAR TAGLLGGIMS YAIGEGVIAL NPVRGVKRPA DRKKDRRLSP EEYRALGRVL AEAEGDRESW QAVSSIQLLC LTGCRMREIA NLRWTEVDFA GRCLRLDNTK EGRSIRPLGQ AAVALLRQIE ERRAGPYVLP ATRGEGGFGG IPDAIERYSK RAGLPGIGAH TLRHSFASTA ADLGCSDSTI GAMLGHAGHG VTSRYIHHLD AVLIMAADRV TTAMAGWLKD RYAERLEPAY PASRTVPLS
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