| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1861 |
|---|
| Symbol | |
|---|
| ID | 5831494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2082448 |
|---|
| End bp | 2084334 |
|---|
| Gene Length | 1887 bp |
|---|
| Protein Length | 628 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641367660 |
|---|
| Product | DNA polymerase III, subunits gamma and tau |
|---|
| Protein accession | YP_001639331 |
|---|
| Protein GI | 163851288 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.33363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGA CGCACGGCAC GCTCACCGAC GAGCCGGGCC TGCCCGGCAT GCCCGCCGCT
GTGTCCGGGT CTGGGCCGGC CACGACGCCT TACCGGGTGT TGGCGCGAAA ATATCGCCCC
CAAACCTTCG ATGACCTGAT CGGCCAGGGC GCCATGGTGC GCACGCTGGG TAACGCCTTC
GCGGCCAACC GCATCCCGCA GGCCTGGATG CTCACGGGCG TGCGCGGCGT CGGCAAGACG
ACCACCGCCC GCATCCTCGC CCGCGGCCTC AACTACCTGC GCACCGGCCA GCCGGATACC
GGCCCCACCG TGTCGATGCC GGAACTCGGC CAGCACTGCC AAGCGATCAT GGAATCCCGG
CACATGGACG TGCTGGAGAT GGACGCCGCC TCGCATACCG GCATCGACGA TGTGCGCGGC
ATCATCGACG GCATCCGCTA TTCGCCGGTC TCGGCCCGCT ACAAGGTCTA CATCGTCGAC
GAGGTCCACA TGCTCTCGGA GAAGGCGTTC AACGCCTTCC TGAAGACGCT GGAGGAGCCG
CCGCCCCACG CCAAGTTCGT GTTCGCGACC ACCGAGATCC GCAAGGTTCC GGTGACGATC
CTGTCGCGCT GCCAGCGCTT CGATCTGCGC CGGGTCGAGG CCGACGTGCT CGCCGCCCAC
CTGAAGAAGA TCTGCGCCGC CGAAGGGGTG GAGGCCGAGG ACGAGGCGCT CGCCGCCGTC
ACCCGCGCCG CCGAGGGCTC GGTGCGCGAC GCGCTCTCGC TGCTCGATCA GGCCATCGCC
CACGGGGCGG GCGCGGTCTC GGCTGCGGGC GTGCGCGACA TGCTCGGCCT CGCCGACCGT
TCACGCATCG TCGATCTGTT CGAGGCCGTG ATGCGCGGCG ACGTGCCGGC CGCCTTCGCT
GAGATCCGCG CTCAATACGA TGCGGGCGCC GACCCGGCGG TGGTGCTCTC GGATCTCGCC
GGCTTCACCC ATCTCGTCAC CCGCCTCAAG CTCGTGCCGG GGGCGGAGGC CGACCCCACC
TTAAGCGAGG CGGAGCGCGT GCGCGGCGTG GCGTTTGCCG GGCGCCTGCC GGTGCGGGCC
CTGTCGCGGG CGTGGCAGAT CCTGCTGAAG GCGCTGCCCG AAGTGCAGGC CGCGCCCCGC
CCGCTCGCGG CCGCCGAGAT GGCGATCGTG CGGCTGGCCT ATGCCGCCGA TCTGCCGACG
CCCGACGAGG CCCTGCGCCA GCTTCGGGCC GACATCGCCT CGTCCGAGGG CAACGGCACC
GCTCGCCCGA GCCTCGGACG CGACGGCGGC TCCCCCATGG CCTCGCACGG CTCGGCCGCG
CTGCAGATGG CGCCGCCCGC CCCGCAGCCC TCGCCTCGGC CGACCCTGGC CGCGGTTCCC
TCCCCCGTCA CCGCCGCGGC GCCGCAACCC GCATCGCGCC CGGCTCCGGT GGCCCCGGCC
GGTCCGCGGC TCAAGCGCTT CGAGGACGTG GTCGCCCAGG CCGAGGCCGC CCGCGACATC
GCCCTCAAGG TGGCGCTGGA GCGCGACGTG CATCTGGTGC GCTTCGAGGA GGGGCGGATC
GAATTCCGCC TCGCCCCCGG CGGCCGGCAG AGCCTCCCGA CCGATCTCGC CCGCGCCCTC
GATGCCTGGA CCGGACGGCG CTGGCTGGTC GCCCTGTCCA AGGAGCAGGG TGCGCCGACG
CTCGCGGAAA ACACGCGGGC GGCCGAGGAA ACCCGCCACC AGAACGCCGC CGCCCACCCG
CTGGTGCGGG AAGTTCTGTC GCGCTTCCCC GGCGCGCAGA TCGTCGATGT GCGTGACAAG
GCGCCGGAGA CCGACAGCGC CGACGCCGCG GCGAACGGCG CCGGGCCGGC AGCCCCTCCG
CCCGAAGAGA CGGACGACGA CGCCTGA
|
|---|
| Protein sequence | MDETHGTLTD EPGLPGMPAA VSGSGPATTP YRVLARKYRP QTFDDLIGQG AMVRTLGNAF
AANRIPQAWM LTGVRGVGKT TTARILARGL NYLRTGQPDT GPTVSMPELG QHCQAIMESR
HMDVLEMDAA SHTGIDDVRG IIDGIRYSPV SARYKVYIVD EVHMLSEKAF NAFLKTLEEP
PPHAKFVFAT TEIRKVPVTI LSRCQRFDLR RVEADVLAAH LKKICAAEGV EAEDEALAAV
TRAAEGSVRD ALSLLDQAIA HGAGAVSAAG VRDMLGLADR SRIVDLFEAV MRGDVPAAFA
EIRAQYDAGA DPAVVLSDLA GFTHLVTRLK LVPGAEADPT LSEAERVRGV AFAGRLPVRA
LSRAWQILLK ALPEVQAAPR PLAAAEMAIV RLAYAADLPT PDEALRQLRA DIASSEGNGT
ARPSLGRDGG SPMASHGSAA LQMAPPAPQP SPRPTLAAVP SPVTAAAPQP ASRPAPVAPA
GPRLKRFEDV VAQAEAARDI ALKVALERDV HLVRFEEGRI EFRLAPGGRQ SLPTDLARAL
DAWTGRRWLV ALSKEQGAPT LAENTRAAEE TRHQNAAAHP LVREVLSRFP GAQIVDVRDK
APETDSADAA ANGAGPAAPP PEETDDDA
|
|---|
| |