Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1851 |
Symbol | |
ID | 5831824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2069160 |
End bp | 2070053 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641367650 |
Product | ABC-2 type transporter |
Protein accession | YP_001639321 |
Protein GI | 163851278 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.894723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGTCTC CCTCGAACCC CGCCGTCGCA GCCCGTGCCG AGGACGGCGC GAAGCCCGTG CCCCATGCGG GCCGGCTCGA TGCGGTCGGC TACCTCATCG CGCTCGACGG CATCGTCCGC CGCGAGCTGC TGCGCTTCTT CCACCAGAAG GAACGCTTCT TCTCGGCGAT GGTGCGCCCG CTGGTCTGGC TGTTCATCTT CGCGGCGGGC TTCCGCAACA CGCTCGGCAC CTCGATCACG CCGCCCTACG AGACCTACGT GCTCTACGAG GCCTACGTGG TGCCGGGGCT CGCGGTGATG ATCCAGCTCT TCAACGGCAT GCAGTCCTCG CTTTCGATGG TCTACGACCG CGAGGTCGGC TCGATGAAGG TGCTGCTGAC CTCGCCCTAT CCACGCTGGT CGCTGCTGCT GGCCAAGCTG GTCGCGGGCG TCAGCGTCTC CATCGTCCAG GCCTACGCGT TCCTCGCGAT CGCATGGTTC TGGGAGACCG GCATTCCGCC CCTCGGCTAC CTCGCCGCCC TGCCGGCCTT CCTGGCCTCG GGGCTGATGC TCGGGGCGAT CGGCCTGTTC CTGTCCTCGC TGGTGCGGCA ACTTGAGAAC TTCGCGAGCG TCATGAATTT CGTGATCTTC CCGATGTTCT TTGCCTCTTC TGCCCTATAT CCGCTCTGGC AGGTTCGGGC ATCGAGCGAG TGGCTCTATC TCATCTGCCA GGCCAACCCG TTCACCCACG CGGTCGAATT GGTGCGTTTC GCTCTCTACG GGCGCTTCGA GCCGGTCGCC TGCGCCGTTG TGGTCGGCAC TGGCCTCCTG TTCTTCACCC TCGCCGCAAT CGCCTACGAT CCGGGCCGCG GCATCATGGC CCGGCGCGGC GGACCGGCCG GCGAAGCCGC CTGA
|
Protein sequence | MRSPSNPAVA ARAEDGAKPV PHAGRLDAVG YLIALDGIVR RELLRFFHQK ERFFSAMVRP LVWLFIFAAG FRNTLGTSIT PPYETYVLYE AYVVPGLAVM IQLFNGMQSS LSMVYDREVG SMKVLLTSPY PRWSLLLAKL VAGVSVSIVQ AYAFLAIAWF WETGIPPLGY LAALPAFLAS GLMLGAIGLF LSSLVRQLEN FASVMNFVIF PMFFASSALY PLWQVRASSE WLYLICQANP FTHAVELVRF ALYGRFEPVA CAVVVGTGLL FFTLAAIAYD PGRGIMARRG GPAGEAA
|
| |