Gene Mext_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1818 
Symbol 
ID5831296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2038783 
End bp2039883 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content67% 
IMG OID641367617 
Productpyrroloquinoline quinone biosynthesis protein PqqC 
Protein accessionYP_001639288 
Protein GI163851245 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C 
TIGRFAM ID[TIGR02111] coenzyme PQQ biosynthesis protein C 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC AATTCCCGCC GCCCGTCCCG GACACCGAGC AACGCCTGCT GAGCCACGAG 
GAGCTTGAGG CGGCGCTCCG CGATATCGGT GCACGGCGCT ACCACAACCT CCACCCGTTC
CACCGGCTGC TGCATGACGG CAAGCTGTCG AAGGATCAGG TCCGGGCCTG GGCGCTCAAC
CGCTACTATT ATCAGGCGAT GATTCCGGTG AAGGATGCGG CGCTCCTGGC CCGCCTGCCG
GATGCGCAGC TTCGCCGGAT CTGGCGCCAG CGCATCGTCG ATCACGACGG CGACCATGAG
GGCGACGGCG GCATCGAGCG TTGGCTCAAG CTTGCCGAAG GCGTCGGCTT CACCCGCGAC
TACGTGCTCT CGACCAAGGG CATCCTGTCG GCGACCCGCT TCTCGGTCGA TGCCTATGTC
CACTTCGTCT CCGAGCGCAG CCTGCTCGAG GCCATCGCCT CCTCGCTGAC CGAGATGTTC
TCGCCGACGA TCATCTCCGA GCGCGTCGCC GGGATGCTGA AGAACTACGA CTTCATCACC
AAGGACACGC TGGCCTATTT CGACAAGCGC CTGACCCAGG CCCCGCGCGA CGCCGATTTC
GCCCTCGATT ACGTCAAGCG GCACGCCACC ACGCCGGAGA TGCAGCGGGC GGCGATGGAT
GCGTTGACGT TCAAGTGCAA CGTGCTCTGG ACGCAGCTCG ACGCGCTCTA CTTCGCCTAT
GTCGCCCCCG GCATGGTGCC GCCGGATGCG TGGCAGCCGG GCGAGGGCCT GGTCGCCGAG
ACGAACTCCG CCGAGGCCAG CCCCGCCGCG ACGACGGCTG AACCCACGGC CTTCTCGGGC
AGCGACGTGC CGCGCCTGCC CCGCGGCGTG CGCCTGCGCT TCGACGAGGT CCGCAACAAG
CACGTGCTGC TCGCCCCCGA GCGCACCTTC GACCTCGATG ACAACGCCGT CGCGGTTCTC
AAGCTCGTCG ATGGCCGGAA CACGGTTTCG CAGATCGCCC AGATTCTGGG CCAGACCTAC
GACGCCGACC CGGCCATCAT CGAAGCCGAC ATCCTCCCGA TGCTGGCTGG CCTCGCGCAA
AAAAGGGTTC TGGAGCGATG A
 
Protein sequence
MTAQFPPPVP DTEQRLLSHE ELEAALRDIG ARRYHNLHPF HRLLHDGKLS KDQVRAWALN 
RYYYQAMIPV KDAALLARLP DAQLRRIWRQ RIVDHDGDHE GDGGIERWLK LAEGVGFTRD
YVLSTKGILS ATRFSVDAYV HFVSERSLLE AIASSLTEMF SPTIISERVA GMLKNYDFIT
KDTLAYFDKR LTQAPRDADF ALDYVKRHAT TPEMQRAAMD ALTFKCNVLW TQLDALYFAY
VAPGMVPPDA WQPGEGLVAE TNSAEASPAA TTAEPTAFSG SDVPRLPRGV RLRFDEVRNK
HVLLAPERTF DLDDNAVAVL KLVDGRNTVS QIAQILGQTY DADPAIIEAD ILPMLAGLAQ
KRVLER