| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1811 |
|---|
| Symbol | |
|---|
| ID | 5830976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2033773 |
|---|
| End bp | 2034627 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641367610 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001639281 |
|---|
| Protein GI | 163851238 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.893534 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCT CAAGCGCACC CGTTTCGGTC GCGGTTGCCG CGCTCCTGCT TTCGGCAGGG
GCGCGGCCCG CTCATGCGCA GCACCTGCCG GATCTCGTCA CGCAGGATGT CCTGCGTGTC
TGCAGCGATC CCGGCAACAT GCCGTTCTCC GAGCGCAAGG GCGGCGGTTT CGAGAACAAG
ATCGCGCAGA TCGTCGCCGA CGAGCTGAAG GTCAAGCTGC GCTATTACTG GCTGACCCAG
GGGCCCGGAT TCGTCCGCAA CACCCTCGGG ACCGGCCTGT GTGACCTGAT CATCGGCACG
TCGGGCGGCG ACATCGTCCA GGCCACCAAC CCGTATTACC GCTCGGCCTA TGTCCTGGTC
GCGCGCAAGG GCGAGTTGGC GGACCTCAAG CGCCTCGACG ACCCGCGGCT GAAGGACAGG
CAGATCGGCA TCATCGCCGG GACGCCGCCC TCCAACCGCC TGAGCGAGCT GAAGCTCGTC
GGCGAGCGGA TCCATGCCTA TGCGCCCTAC GCCTTCGGGG CCGAGCGCAA GCATCAGACG
GTCGCGGCGG AAGTGATCGC GGATCTCGCC GAGAAGAAGA TCGACGTGGC GATCCTGTGG
GGGCCGGCCG CGGGTTGGCT GGCCAAGCAG AGCGGTGTGC CGATGGATGT CGTGCCGCTC
CTTCACGAGC CGGGACGGCC GCCGCTGACC TTCCGTGTCT CGATGGGCGT GCGCCACAAC
GAGAACGACT GGAAGCGCAG CCTCAACACC GTCCTGCGCA AGCGCAAGGC CGACATCGAG
GCGGTGTTGC GCGAATACGA GGTGCCGCTG CTGGCGGAGG AGGACACCAA GCCTCTCGAC
GCCGCGGACG AGTGA
|
|---|
| Protein sequence | MTRSSAPVSV AVAALLLSAG ARPAHAQHLP DLVTQDVLRV CSDPGNMPFS ERKGGGFENK
IAQIVADELK VKLRYYWLTQ GPGFVRNTLG TGLCDLIIGT SGGDIVQATN PYYRSAYVLV
ARKGELADLK RLDDPRLKDR QIGIIAGTPP SNRLSELKLV GERIHAYAPY AFGAERKHQT
VAAEVIADLA EKKIDVAILW GPAAGWLAKQ SGVPMDVVPL LHEPGRPPLT FRVSMGVRHN
ENDWKRSLNT VLRKRKADIE AVLREYEVPL LAEEDTKPLD AADE
|
|---|
| |