Gene Mext_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1798 
Symbol 
ID5832999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2018182 
End bp2018808 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID641367597 
Productformiminotransferase-cyclodeaminase 
Protein accessionYP_001639268 
Protein GI163851225 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3404] Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.456873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGA ACGAGACGAT CGAAACATTC CTCGACGGCC TGGCGAGCTC GGCCCCGACC 
CCCGGCGGCG GCGGTGCCGC CGCGATCTCC GGCGCCATGG GCGCGGCGCT GGTGTCGATG
GTGTGCAACC TCACCATCGG CAAGAAGAAG TATGTCGAGG TCGAGGCTGA CCTCAAGCAG
GTGCTGGAGA AGTCGGAAGG CTTGCGCCGC ACGCTCACCG GCATGATCGC CGACGACGTC
GAGGCTTTCG ACGCGGTGAT GGGCGCCTAC GGGCTGCCGA AGAACACCGA CGAAGAGAAG
GCCGCCCGCG CCGCGAAGAT TCAAGAGGCG CTCAAGACCG CGACCGACGT GCCGCTTGCC
TGCTGCCGCG TCTGCCGCGA GGTGATCGAT CTGGCCGAGA TCGTCGCCGA GAAGGGCAAT
CTCAACGTCA TTTCGGATGC TGGCGTCGCC GGGCTCTCGG CCTATGCCGG CCTGCGCTCG
GCAGCCCTCA ACGTCTACGT CAACGCCAAG GGCCTCGACG ACCGCGCCTT CGCCGAGGAG
CGGCTGAAGG AGCTGGAAGG CCTGCTGGCC GAGGCGGGCG CGCTCAACGA GCGGATCCAC
GAGACCGTGA AGTCCAAGGT GAACTGA
 
Protein sequence
MAANETIETF LDGLASSAPT PGGGGAAAIS GAMGAALVSM VCNLTIGKKK YVEVEADLKQ 
VLEKSEGLRR TLTGMIADDV EAFDAVMGAY GLPKNTDEEK AARAAKIQEA LKTATDVPLA
CCRVCREVID LAEIVAEKGN LNVISDAGVA GLSAYAGLRS AALNVYVNAK GLDDRAFAEE
RLKELEGLLA EAGALNERIH ETVKSKVN