| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1782 |
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| Symbol | |
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| ID | 5832900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1999618 |
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| End bp | 2002995 |
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| Gene Length | 3378 bp |
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| Protein Length | 1125 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641367581 |
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| Product | PAS sensor protein |
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| Protein accession | YP_001639252 |
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| Protein GI | 163851209 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.522243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACGG GAGCGGCGAG CGAGGCCGAG CGCCTCGCGG CCCTGCACGC GCTGCGCATT
CTGGATAGCG ATCCCGAGGC GCAGTTCGAC GCCGTGTGCC GGACGGCGCA GCGCCTGTTC
GGGGTCGCGA TCGCCTACAT CTCCCTGGTC GATGCCGAGC GGCAATGGCT GAAGGCCTGC
GTCGGCATCA TGCCGACGCA GACGTCGCGC GCAGGCTCCT TCTGCGATCG GACGATCGCG
CAGGATGCGA TGCTCGTCGT TCCCGATGCC CGCCGCGACC CGCGCTTTTC CGGTCTCGAG
ATCGTGACCG GCCCGCCTCA CATCGTGTTT TACGCCGGCG CACCGCTGAT CCTGCGGCCG
GGCGTGCGGC TCGGCTCCCT CTGCCTCGCC GATTCGCAGC CGGGCGATTT CACCCCAGAG
GACGCGGCAG CCTTGCGCGA TCTTGCCGAG ATCGTGACGG CGCAGATGCG GCTGCGGCGC
GACAACCTCG CCTTCGCCAG CGAGCGGGCG CTGCGGCAGA TCCATGAGAG CACGATCCGC
GCCCAGGGCG TGGAGATCGA GCGGCGGGCA AGCGCCAACT CCCTCCTCAC CATGGCCGAG
CAGATCGCCC AGGTCGGGCA TTGGCGCCTC AACTTCGCCA GCGGCCAACC GATCTACTCC
GAGAGTCTTC TGCGCATCGC CGGCCTCGAC GCCGCGGCTC CGACGACCCG ACATCCCGGC
CTCGCTCAGT TGTGCCATCC CGCGGATCGG GGGCGCGTCG AGGCGATCAT CGCCGCAGCG
ATCGCGGGCG GGCAGGATTT CGAGGTCGAG ACGCGGTTCG TGCGGCCCGA CAAGACGATC
CGCGACGTGA TGGTGCGCGG CACCTGCAAG ACCGACGAGG CGGGCCGGAC GATCGGATTG
TTCGGCATCC TCATGGACGT GACGGACCGG GTGCAGATCC GGGCGGAGAT GCGCCGCAGC
GAGATGCGCT ACCGCAGCCT CGCCGACGCC CTGCCGCTGC TCGTCTGGAC CGTCGATCCG
GACAGCGGCG AGGCGACCTA CGTCAACACG CGCTTCGAGG ATTACTACGG CCCGATCGGC
GCCGCGCGGG TGCAGCGGCT CGCCCGCAAC CATCCCGACG ACGCGCCCGC CATGGAGGCG
GCGTGGCAGG CGGCTCAGGC CAGCGGCCAG GGCTATGACG GCCAGTGGCG CCTGCAGGCG
CGGGACGGCT CGTACCGCTG GCACAAGATG TCGATTACCC CGATCCGCAA CGCGGGCGAC
CCGGCCGGGA TCACCGAGTG GATCGGCACC GCGCTCGACA TCGACGAGAT CGTCTCCGCG
CGGCTGGCGG TGGAGGATAC GAGCCGCCTG CTCGGCATCG CCCTGGAGGG CGCGGAGGCC
GGCACCTTCG ACTGGAATCT GCGCACCGGC ATCACAGTGC TGTCGCCGGA GAGCGTGCGC
CTCTACGGTC TGCCCGAGAC CGGTGAACCG CGGGCCCTAT CGCCGACGGA ATGGACTGCG
ACCATCCACC CCGACGACGT CGTCGAGGCG TGGAACCGGA TCCACCACGC CGTCGATTCG
CGGTCCCGCT TCATCGCGGA ATACCGGGTG GGCCAGCGCT GGCTCTACAC CTCCGGCCGC
ACCCTCTACG AGGGCGACGG CCGCCCCTAC CGGATGCTCG GGCTGCATCT CGACATCACC
GAGCGCAAGG CGGCCGAGGC GGCCCTGCGC GCCGCCACCG CCGAGGCCCG CGCCGCCACG
GTCGAGGCCG AGCGGGCGAG TGCGGCCAAG AGCGAGTTCC TCGCGGCCAT GAGCCACGAG
ATCCGCACGC CGCTGAACGG GATCCTCGGC TATGCCGACC TGCTCCTCGA CCGCAGAGAC
CACGATCCGG AGGATCAGCG CCGCCTCGAA CTGATCCGCG TCTCGGGCGA GTCCCTGCTC
ACCGTCGTCA ACGACGTTCT CGACGTCTCC AAGATCGAGG CCGGCCAACT CGAACTCGAC
CCGCTTCCCT TCGCTCTGGG CAAGCTGATC GAGGACACGG TCGCGATCAT GCGCGGCACC
GCCCTGAAGA GCGCGCTCAC CGTCGAGGCG CGGATCGATC CGGATCTGCC CGCGAGCGTG
GTCGGCGACG CGAACCGCCT GCGGCAGGTG CTGTTCAACC TGCTCAACAA CGCGGTCAAG
TTCACGCCGG CCGGCTCCGT CGTCCTCACC GCCCGCTACG AGGGCTCCGT CCCGGGCGCC
GACGGCGGCA CCGCGGAAGC TTTGCGCTTT GAGATCAGCG ACACCGGCAT CGGCATCGCG
CCCTCGCAGC GGCACCGGCT GTTCAAGCCC TTCAGCCAGG TCGACGGCTC GATCAGCCGG
CGCTTCGGCG GGTCGGGCCT GGGGCTCGCG ATCTGCCATC GCCTCGTGAC CATGATGGGG
GGCGCGATCG GCGTCGAGAG CCGGGAGGGC GCCGGCTCGA CCTTCTGGTT CACCCTGGCC
CTGCCGCGCG CCACCACGCC GCCCGCCGCG CAGCCGGTGA CCGGCCCGCA TCGCTTGGAG
GCGGCGCGGC CGGCCCGGCT CCTGCTCGTG GAGGACGTGC CGATCAACCA GACGCTGGCC
CGCGCCGTGC TGGAAGTGCA GGGCTACCGC GTCGATGTGG CGGGGGACGG GAACGCGGCG
ATCGCGGCCG TCGAGGCCAC CTATGGCCCG GAGGAGGCCG GCACCGACCC TTACGCCGTC
GTGCTGATGG ACGTGCAGAT GCCGGGCATG GACGGCCTCA CCGCGACCCG CCGCATCCGC
GCCATGACGG GACCCGCCGC CCGCCTGCCG ATCGTGGCGA TGACCGCCAA CGTCCTCGAC
GGGCAGGTGC AGGAATTCAT CGCGGCGGGC ATGGACGACC ATGTCGGCAA GCCGTTCAAG
CGCGCCCAGC TCTGCGCGGT GATCGAGCAC TGGCGGGTCG TCGGCGCCGA GCGGGCGCGG
GAGGCGGTAT CCCCAGCGCC TCCGCCCGGA GACATCCTCG GGCGTCGCCC CGAAACCGGG
CCGCCGGATT TCACGGATCG CGGGCACGGC GACAGCGAAC CGTTGCTCGA CCGCGCCGCC
TTTGCCGCCG TCCAGGCCAC GATGGGCCGC GAGCGCGTGC TGTCGCTGCT GTCCCTGCTC
GAACTCGACC TCGAGCTGCG CTTCCTCCCG GAGGGGGCCC AGCCGGGCCG GACCGATTTC
GACCGTGAGC AACTCGCCTA CGACGCACAC GCCATGGTCG CCGCGGCGGG CGCCCTCGGC
TTCCTCGCCC TGTCCGGGCT GTGCCGGGAG ATCGAGGACG CCTGCCGGGA CGGCGGCGCG
CTTCCCGCCC TGATCCGCCG CCTCGCGACG CTGCGGACGG ATACGCTCGG AACGATCAGG
GCCCTCAGGG CGGCGTGA
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| Protein sequence | MTTGAASEAE RLAALHALRI LDSDPEAQFD AVCRTAQRLF GVAIAYISLV DAERQWLKAC
VGIMPTQTSR AGSFCDRTIA QDAMLVVPDA RRDPRFSGLE IVTGPPHIVF YAGAPLILRP
GVRLGSLCLA DSQPGDFTPE DAAALRDLAE IVTAQMRLRR DNLAFASERA LRQIHESTIR
AQGVEIERRA SANSLLTMAE QIAQVGHWRL NFASGQPIYS ESLLRIAGLD AAAPTTRHPG
LAQLCHPADR GRVEAIIAAA IAGGQDFEVE TRFVRPDKTI RDVMVRGTCK TDEAGRTIGL
FGILMDVTDR VQIRAEMRRS EMRYRSLADA LPLLVWTVDP DSGEATYVNT RFEDYYGPIG
AARVQRLARN HPDDAPAMEA AWQAAQASGQ GYDGQWRLQA RDGSYRWHKM SITPIRNAGD
PAGITEWIGT ALDIDEIVSA RLAVEDTSRL LGIALEGAEA GTFDWNLRTG ITVLSPESVR
LYGLPETGEP RALSPTEWTA TIHPDDVVEA WNRIHHAVDS RSRFIAEYRV GQRWLYTSGR
TLYEGDGRPY RMLGLHLDIT ERKAAEAALR AATAEARAAT VEAERASAAK SEFLAAMSHE
IRTPLNGILG YADLLLDRRD HDPEDQRRLE LIRVSGESLL TVVNDVLDVS KIEAGQLELD
PLPFALGKLI EDTVAIMRGT ALKSALTVEA RIDPDLPASV VGDANRLRQV LFNLLNNAVK
FTPAGSVVLT ARYEGSVPGA DGGTAEALRF EISDTGIGIA PSQRHRLFKP FSQVDGSISR
RFGGSGLGLA ICHRLVTMMG GAIGVESREG AGSTFWFTLA LPRATTPPAA QPVTGPHRLE
AARPARLLLV EDVPINQTLA RAVLEVQGYR VDVAGDGNAA IAAVEATYGP EEAGTDPYAV
VLMDVQMPGM DGLTATRRIR AMTGPAARLP IVAMTANVLD GQVQEFIAAG MDDHVGKPFK
RAQLCAVIEH WRVVGAERAR EAVSPAPPPG DILGRRPETG PPDFTDRGHG DSEPLLDRAA
FAAVQATMGR ERVLSLLSLL ELDLELRFLP EGAQPGRTDF DREQLAYDAH AMVAAAGALG
FLALSGLCRE IEDACRDGGA LPALIRRLAT LRTDTLGTIR ALRAA
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