Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1772 |
Symbol | panB |
ID | 5834913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1990976 |
End bp | 1991800 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641367571 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001639242 |
Protein GI | 163851199 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAGG TCGTTCAAAC GCGTCGTCTC CAGGCGGTCG ATCTGATCAA GCGCAAGGCC GAGGGGCGCA AGATCATTTC GCTCACCGCC TATCACGCCC ACACCGCGGG CATCGTCGAT GCCTATTGCG ACTTCGTGCT GGTGGGTGAT TCCCTCGGCA TGGTCATGCA CGGCATGGAA TCGACCCTGC CGGTGACCCT GGAGATGATG ATCCTCCAGG CTCAGGCCGT GATGCGCGGC ACCTCCCGTG CCCTGGTCGT GGTCGACATG CCGTTCGGCT CCTACGAGGC GAGCCGCGAG CAGGCCTTCC TCAACGCCGC CCGCGTCCTC AAGGAGACGG GGGCCGGGGC GATCAAGCTG GAGGGCGGGG CGCGCTTTGC CGAGACGGTC GCGTTCCTGA CCGAGCGGGG CGTGCCGGTG ATGGGCCATA TCGGCCTCAC CCCCCAATCG GTGAACACGA TGGGCGGCTT CAAGGTGCAG GGGCACGGGG CCGGCGACGA GGACCGCCTG CGGGCCGATG CCCGCGCGAT CAGCGATGCG GGCGCCTTTG CCATCGTGCT GGAGGGCATC GTCGAGCCGG TGGCGCGGGC CATCGCCACC GACCCCGCGA TCCGCGCGGC GACCATCGGC ATCGGCGCCA CCGCCGCCTG CGACGGGCAG ATCCTCGTGC TCGAAGACAT GCTGGGCCTG AGCGATCGGG TGCCGCGCTT CGTCAAGAGC TACGGCTCGC TGCGCGCCCA TATCGAGGAG GCCGTGCGCG CCTATGCCGA CGAGGTGCAG GCGGGCCGCT TCCCGGCCGA GGGGCACACC TACCCGCCGC GGTGA
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Protein sequence | MSQVVQTRRL QAVDLIKRKA EGRKIISLTA YHAHTAGIVD AYCDFVLVGD SLGMVMHGME STLPVTLEMM ILQAQAVMRG TSRALVVVDM PFGSYEASRE QAFLNAARVL KETGAGAIKL EGGARFAETV AFLTERGVPV MGHIGLTPQS VNTMGGFKVQ GHGAGDEDRL RADARAISDA GAFAIVLEGI VEPVARAIAT DPAIRAATIG IGATAACDGQ ILVLEDMLGL SDRVPRFVKS YGSLRAHIEE AVRAYADEVQ AGRFPAEGHT YPPR
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