Gene Mext_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1772 
SymbolpanB 
ID5834913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1990976 
End bp1991800 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content69% 
IMG OID641367571 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_001639242 
Protein GI163851199 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGG TCGTTCAAAC GCGTCGTCTC CAGGCGGTCG ATCTGATCAA GCGCAAGGCC 
GAGGGGCGCA AGATCATTTC GCTCACCGCC TATCACGCCC ACACCGCGGG CATCGTCGAT
GCCTATTGCG ACTTCGTGCT GGTGGGTGAT TCCCTCGGCA TGGTCATGCA CGGCATGGAA
TCGACCCTGC CGGTGACCCT GGAGATGATG ATCCTCCAGG CTCAGGCCGT GATGCGCGGC
ACCTCCCGTG CCCTGGTCGT GGTCGACATG CCGTTCGGCT CCTACGAGGC GAGCCGCGAG
CAGGCCTTCC TCAACGCCGC CCGCGTCCTC AAGGAGACGG GGGCCGGGGC GATCAAGCTG
GAGGGCGGGG CGCGCTTTGC CGAGACGGTC GCGTTCCTGA CCGAGCGGGG CGTGCCGGTG
ATGGGCCATA TCGGCCTCAC CCCCCAATCG GTGAACACGA TGGGCGGCTT CAAGGTGCAG
GGGCACGGGG CCGGCGACGA GGACCGCCTG CGGGCCGATG CCCGCGCGAT CAGCGATGCG
GGCGCCTTTG CCATCGTGCT GGAGGGCATC GTCGAGCCGG TGGCGCGGGC CATCGCCACC
GACCCCGCGA TCCGCGCGGC GACCATCGGC ATCGGCGCCA CCGCCGCCTG CGACGGGCAG
ATCCTCGTGC TCGAAGACAT GCTGGGCCTG AGCGATCGGG TGCCGCGCTT CGTCAAGAGC
TACGGCTCGC TGCGCGCCCA TATCGAGGAG GCCGTGCGCG CCTATGCCGA CGAGGTGCAG
GCGGGCCGCT TCCCGGCCGA GGGGCACACC TACCCGCCGC GGTGA
 
Protein sequence
MSQVVQTRRL QAVDLIKRKA EGRKIISLTA YHAHTAGIVD AYCDFVLVGD SLGMVMHGME 
STLPVTLEMM ILQAQAVMRG TSRALVVVDM PFGSYEASRE QAFLNAARVL KETGAGAIKL
EGGARFAETV AFLTERGVPV MGHIGLTPQS VNTMGGFKVQ GHGAGDEDRL RADARAISDA
GAFAIVLEGI VEPVARAIAT DPAIRAATIG IGATAACDGQ ILVLEDMLGL SDRVPRFVKS
YGSLRAHIEE AVRAYADEVQ AGRFPAEGHT YPPR