Gene Mext_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1701 
Symbol 
ID5832638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1921495 
End bp1922634 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content67% 
IMG OID641367500 
Productbasic membrane lipoprotein 
Protein accessionYP_001639171 
Protein GI163851128 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.126126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCCGG CCCGGAAAGA CGGATCACGC CTCGTGTCAG CCCATCCTTT CTCCCGCAGA 
CATCTTCTCG GCGGTGCGGC CGCCCTCTCG CTCGGCGCGC TGCCCTTCGG TCGCGCCCGG
GCCGCCGGCC CGCTCACCGT CGGGTTCATC TATGTCGGGC CGAAGGACGA TTACGGCTAC
AACCAAGCCC ACGCCCAAGG TGCGGCCGCC CTCAAGGCGA TTCCCGGCCT TCAGGTCGTC
GAGGAGGAGA ACGTCCGCGA GACCACCGAC GTCCAGAAGA CCATGGAGAG CATGATCAAC
CTGGACGGCG CGAGCCTCGT CTTCCCGACG TCCTTTGGCT ACTTCGATCC GCACGTGCTG
ATCGAGGCCA AGAAGAACCC GAAGGTGCAG TTCCGCCATT GCGGCGGCCT CTGGACCGAG
GCGAACCCGA AGAACGCCGG CTCGTATTTC GGCTACATCG CCCAAGGGCA GTACCTGAAC
GGCATCGTCG CCGCCCACGC CTCGAAGTCG AAGCGGCTCG GCTTCGTCGC CGCCAAGCCG
GTCCCCCAGG TGCTCAACAA CGTCAACGGC TTCCTGCTCG GCGCGCGCAG CGTCGATCCG
TCCATCACCC TGCAGGTGAT CTTCACCGGC GAGTGGTCGC TCGCGGTCAA GGAAGCGGAG
GCGACCAACG CGCTGATCGA CGGCGGCGCC GACGTGATCA CCTGCCACGT CGATGGTCCC
AAGGTCGTGG TCGAGACCGC TGCGCGGCGC GGGGCCTTCG TCTGCGGCTA CCACGCCGAC
CAGTCGGCAC TCGCCAAGGA CAAGTACCTC ACCGGCGCCG AGTGGAACTG GGCCTCGATC
TACAAGGGCT TCGTCGCCGA CATGCAGGCG GGCAAGGCGC CTCCGAACTT CGTGCGCGGC
GGCCTGCCGG ACGGCTTCGT GAAGATGAGC CCCTACGGGC CCGCGGTGTC CGAGGAAGCA
CGCCGCAACG CCGACGCGGT CAAGGCCGAG ATGATGAAGG GCGGCTTTGC CATCATCAAG
GGCCCGCTCA AGGACAACAA GGGCAACGAG ATCGCCGGCC CCGGCAAGGC GTTCGCCGAG
AACGCGATCG AGCTGGAGAA GACCAACTAC CTCGTCGAGG GTGTGAAGGG CTCGGCCTGA
 
Protein sequence
MPPARKDGSR LVSAHPFSRR HLLGGAAALS LGALPFGRAR AAGPLTVGFI YVGPKDDYGY 
NQAHAQGAAA LKAIPGLQVV EEENVRETTD VQKTMESMIN LDGASLVFPT SFGYFDPHVL
IEAKKNPKVQ FRHCGGLWTE ANPKNAGSYF GYIAQGQYLN GIVAAHASKS KRLGFVAAKP
VPQVLNNVNG FLLGARSVDP SITLQVIFTG EWSLAVKEAE ATNALIDGGA DVITCHVDGP
KVVVETAARR GAFVCGYHAD QSALAKDKYL TGAEWNWASI YKGFVADMQA GKAPPNFVRG
GLPDGFVKMS PYGPAVSEEA RRNADAVKAE MMKGGFAIIK GPLKDNKGNE IAGPGKAFAE
NAIELEKTNY LVEGVKGSA