Gene Mext_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1688 
Symbol 
ID5831896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1901283 
End bp1902143 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content70% 
IMG OID641367487 
Producthypothetical protein 
Protein accessionYP_001639158 
Protein GI163851115 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.757189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCTGC TTGGCGCCGC AATCCTGCTC TGGGGGGCGA ACTGGCCGGT GATGAAGCTC 
GGCCTCGGCC ATGTTTCGCC CCTGTGGTTC TCCGCTGCCC GGTTCGCCAC GGGGGCCGCC
TGCCTGTTCA CTTGGCAAGC CCTGCGCGGC GAGGTGTGGT GGCCTCAGCG CAGGGACCTG
CCTCGCGTCG CCTCCATCGG CTTGTTTCAG ATGATGCTGT TCACAGCCCT CGGGACCGTG
GCGATGATGC ATCTTCCGGC GGGGCGGTCG GCGATCCTGA GCTACACCAC GCCCCTCTGG
GTGCTCCCGG TCGCGGTCCT GGTGTTCGGC GAACGGATCG AGCGTCGGCA TTGGGCCGGT
CTCGGCTTGG CTGGGCTCGG CGTTCTCGTC CTTCTCAATC CGCATGCGGT CGACTGGGGG
GACGGGCAGG TCGTCGGCGC CAACGCCATG CTGGTGGCGG CCTCGCTCGC CTGGGCCGTG
TGCATCCTGC ACCTGCGCTA CGGGCGAGCC TCGGCCTCGG CGATCCAGCT CGCACCCTGG
CAGATGCTCC TCGCCGCGGC CACCCTGGCC CCGCTGGCCT ATGCCGTCGA AGGTCCCTTC
ACGGGCGACG GCACGGCAGC CTTCTGGGCC TGCCTCGGCT TTGTGGGACC CGTCGCCACA
GCCTTCTGCT TCTGCGCCGT CAACGCGGCG AGCGCCCGGC TGCCGGCCAG CGCGACCGCG
ACCCTGATGA TGGCGGTGCC AGTCACCGGT CTCGCCCTCT CCACGGCAAC CCTGCACGAA
GACCCGAGCC TCGACCTGAT CGTCGGAGCC CTCGCGATCG TGCTCGGCAT CGCCGCGAGC
GCGCAACGAT CCCATCCCTG A
 
Protein sequence
MLLLGAAILL WGANWPVMKL GLGHVSPLWF SAARFATGAA CLFTWQALRG EVWWPQRRDL 
PRVASIGLFQ MMLFTALGTV AMMHLPAGRS AILSYTTPLW VLPVAVLVFG ERIERRHWAG
LGLAGLGVLV LLNPHAVDWG DGQVVGANAM LVAASLAWAV CILHLRYGRA SASAIQLAPW
QMLLAAATLA PLAYAVEGPF TGDGTAAFWA CLGFVGPVAT AFCFCAVNAA SARLPASATA
TLMMAVPVTG LALSTATLHE DPSLDLIVGA LAIVLGIAAS AQRSHP