| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1677 |
|---|
| Symbol | |
|---|
| ID | 5833073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1891517 |
|---|
| End bp | 1892407 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641367476 |
|---|
| Product | LysR substrate-binding |
|---|
| Protein accession | YP_001639147 |
|---|
| Protein GI | 163851104 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATC AGCTCACCCT CGATCAGTTG CGAACCTTCG TCGCCGCCGT CGACACCGGC
AGCTTCTCGG CGGCCGGACG CAAGCTCGGG CGCGCTCAGT CCCTGATCAG CCAATCCCTC
GCCAACCTGG AGAGCCAGTC CGGCATCAAG CTGTTCGACC GTTCCAGCCG CTATCCGATC
TTGACCGAGG CCGGCAGAGT GCTGTTGGCC CATGCCCGTG CGACCGTCGC CGCCGCCGAG
ACCTTCAAGT CGCACGCAAA GGACCTCGCC GGCGGTCTGG AGCCAGAGGT CAGCATCGTG
CTCGACGTCC TGTTTCCGAT CCAGGTGCTG ACAGCCGCCG TGGTTGCGTT TCAACCGGCA
TTCCCGAGGA CCCCACTTCG GGTACAGGTC GAGACCCTCG GCGCGGTGAT CGCACCGGTT
CTCGACGGAC GTTGCGCATT CGCGGTCGCC GGCGCCACTC CCCTGCTACC CCCCGAACTC
GCACGCGAGC CATTATGCCA GGTTGAGTTG GTGATGGTGG CCTCGCCCGC GCATCCCCTC
GGCCGACGGA CGGGGACGAT CCCCACTGCC GACCTGGCCG AGCATGTCCA ATTGGTCCTG
ACCGACCGGA GCGAGCTAAC CAAAGGGCGC GAGTTCGGCG TATTCTCGCC GAGGACCTGG
CGGCTTGCGG ATCTCGGGGC GAAGCACGCA TTCCTGCGCT CGGGCCTGGG CTGGGGAGGG
ATGCCCCTCG ACGTCGTCGC GGATGACCTT GCCAGCGGTC TCCTCGTGAG ACTGGACATC
GCCGCCGTGC CGAAGGGCGG CCTGTTCCTG CCGATGTGGG CCGTCTACCC GATTGAGCGC
CCGCCGGGCC CGGCCGGCCG CTGGCTGATC ACACAGCTGG CCTCCCCGTG A
|
|---|
| Protein sequence | MLDQLTLDQL RTFVAAVDTG SFSAAGRKLG RAQSLISQSL ANLESQSGIK LFDRSSRYPI
LTEAGRVLLA HARATVAAAE TFKSHAKDLA GGLEPEVSIV LDVLFPIQVL TAAVVAFQPA
FPRTPLRVQV ETLGAVIAPV LDGRCAFAVA GATPLLPPEL AREPLCQVEL VMVASPAHPL
GRRTGTIPTA DLAEHVQLVL TDRSELTKGR EFGVFSPRTW RLADLGAKHA FLRSGLGWGG
MPLDVVADDL ASGLLVRLDI AAVPKGGLFL PMWAVYPIER PPGPAGRWLI TQLASP
|
|---|
| |