| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1665 |
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| Symbol | |
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| ID | 5831695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1872857 |
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| End bp | 1874203 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641367464 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_001639135 |
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| Protein GI | 163851092 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.195288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACAT CTCCCGATCG GATGCCGCGC CCCTTGCGGC GGCACGAACC GCAATCCCGC
ACGAACGTCG CGTTCTCCGT CGGCCCGCGC ATCGTCGCCG GGTTCATCTT CGGCGCGGCG
CTCGTCGGCG GCGTCGGCGG CTGGGCCGCC ACGACCGATC TCAGCGGCGC GATCCTCGCT
TCCGGATCCG TCGCCGTCGA TCAGCGAGCC AAGTCCGTGC AGCACCGCGA CGGCGGCGTG
GTCGGCGAGA TCCTCGTGCG CGATGGGCAG CCGGTCACGG CCAGCCAAGT GCTCCTCAGG
ATCGACGACG CGCAGACCCG CGCGGAACTC GCCATCGTGA AGGGACAACT GGTGGAACTC
GCCGCCAAGA AGGCGCGGCT CCTGGCGGAG CGCGACGGGC AGCGCGAGGT CAGCTTCCCG
CAAGCCCTGC TTCACCAGGG CGCCGAGGTG CAGTCGATCC TGGAGGGCGA ACTCCGGCTG
TTCCGGGGCA ACCTCGCCGG CCGTGACAGC CAGCGCCAGC AGCTCGAACT CCAGATCGGG
CAGATCGCTG AGGAGATCGC CGGCCTCACG AAGCAGCGGG ACGCCAAGAG AGACGAACTG
GCCGTCCTCA CCACCGAGCA TGGCAAGCTA TCGATCCTCG TCGAGAAGCA GCTCTACGAG
AGTTCCCGCT TCCTGCCGAT CACCCGCGAC AAACACCGCC TGGCCGGCGA GCAGGGGTCG
TTGGAAGCCT CCATCGCGCG GGCGAAGACG CGGACGAGCG AGATCCGCGT CCAGATCCTC
GCCATCGCAG ACACCGCGCG GACCGAGGCA CAGCGCGAGC TCAGTCAGGT CGATGCCAAG
GCGGCAGAGC TGAGCAACCG TCGCGTGGCG TTGGACGACC GGCTGACGCG CACCGAGATC
CGTGCCCCCG TGACCGGCAT CCTGCACGAA TTGAAGACCT TTACGGTTGG CGGCGTCGTC
ACCCCCGCCG ATATTCTGGC GACCGTGGTA CCCGAGGACG CGCGGCTCAA GATCGAGATC
CGCATCCCGC CGACCAGCAT CGACCAGATC GGCGTCGGCC GCGCGGCCCG GGTCCGCTTC
ACCGCCTTCA GCCAGCGCAC CACCCCTGAA CTCAAGGGAG TGCTGACCTA CGTCTCGCCC
TCGACGACGA AGGGCCCACG GGACGAGGCG TTCTATATCG GGCATGTCGA GCTCAAGGAT
GGCGAGATTG AACGCCTGGG AGGCTCGGCC CGCCTTATCC CTGGAATGCC CGTCGAAGTT
CAGGTCGCTA CGGATGAGAG AACAGCAATG TCCTACCTGA TGAAGCCGCT TCAAGACCAG
TTTAGTCGCG CATTCCTTGA GCGATGA
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| Protein sequence | MRTSPDRMPR PLRRHEPQSR TNVAFSVGPR IVAGFIFGAA LVGGVGGWAA TTDLSGAILA
SGSVAVDQRA KSVQHRDGGV VGEILVRDGQ PVTASQVLLR IDDAQTRAEL AIVKGQLVEL
AAKKARLLAE RDGQREVSFP QALLHQGAEV QSILEGELRL FRGNLAGRDS QRQQLELQIG
QIAEEIAGLT KQRDAKRDEL AVLTTEHGKL SILVEKQLYE SSRFLPITRD KHRLAGEQGS
LEASIARAKT RTSEIRVQIL AIADTARTEA QRELSQVDAK AAELSNRRVA LDDRLTRTEI
RAPVTGILHE LKTFTVGGVV TPADILATVV PEDARLKIEI RIPPTSIDQI GVGRAARVRF
TAFSQRTTPE LKGVLTYVSP STTKGPRDEA FYIGHVELKD GEIERLGGSA RLIPGMPVEV
QVATDERTAM SYLMKPLQDQ FSRAFLER
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