Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1642 |
Symbol | |
ID | 5832583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 1832108 |
End bp | 1832839 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641367440 |
Product | regulatory protein TetR |
Protein accession | YP_001639112 |
Protein GI | 163851069 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.906249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.298485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCCGT ACGGATCTTT CACCATCCCC GTCACCCTGG CCGAGAGCGA GAGGGAGGCG AACGATCCAG TTTCCGATCC GCGTGCCGCT CCCTCTCGAC CGTCGCGTCT CACCGGCCCG GCCGCCCGCG CCCGGTCCAC GCCGGTCTCG ACGGACGCGC GGCTGCTCGC CATCGCCACG GAGCACCTGA CCCGGCTCGG CCCGAAACGG GTGACGGTGG TGGCGGTCGC GGCGGAGGCG GGCATGACCC ATGCCAACGT CTACCGCTAC TTCCCCTCGA AGGACGCCCT GCTCGATGCG GTCGCCGGCC GCTGGCTGCG CGATCTGGAA ACGGAACTCG CCGGCATCGC CGACGCGCCC GATCCCGCCG ACGACAAGAT CGAGCGCTTC GTCAGCGCGC TGGCCAGCGC CCAGAGCGAG ATGCTGACCC GCGAGCCGAA CCTGTTCGCC GTGCATCTCG ACGCCACCGT CGCCTCCCGT CCGATCGCCC GCCGCCACCG CGTGCGACTG CGCGCGCTCG TCGAGCGCGT GGTGGAAGAG GGCATCGGCA CCGGCGTCTT CGCCGCCCGC GACCGCGAAC GCGCCATCGC CGTCATCTTC GACGCGAGCT ACCGCTTCAC CCATCCGGTC GCGATCCAGC ACGACGCGGA CGTGCCCCGC GACCTGCTCG ATGCCCGGCT CGGCGCGGTG ATCCAATCGA TCCAGCGGGC GCTGCGGACC GGTACTTTCT GA
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Protein sequence | MLPYGSFTIP VTLAESEREA NDPVSDPRAA PSRPSRLTGP AARARSTPVS TDARLLAIAT EHLTRLGPKR VTVVAVAAEA GMTHANVYRY FPSKDALLDA VAGRWLRDLE TELAGIADAP DPADDKIERF VSALASAQSE MLTREPNLFA VHLDATVASR PIARRHRVRL RALVERVVEE GIGTGVFAAR DRERAIAVIF DASYRFTHPV AIQHDADVPR DLLDARLGAV IQSIQRALRT GTF
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