Gene Mext_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1638 
SymbolrecR 
ID5834068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1826123 
End bp1826728 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content72% 
IMG OID641367436 
Productrecombination protein RecR 
Protein accessionYP_001639108 
Protein GI163851065 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0212504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.114936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAG CCGTCGCCGG CCCCGAGATC GAGCGCTTGA TCCAGCTTCT CGGGCGCATG 
CCGGGGCTCG GGCCCCGCTC CGCCCGCCGG GCCGCGCTCC AGCTCATCAA GAAGCGCGAG
ACCCTGCTCG CGCCCCTGGC CGACGCAATG CGTGTCGCGG CCGAGCGCAT TGTGGTGTGC
CGCTCCTGCG GCAACGTCGA TACCAGCGAC CCCTGCACGA TCTGCCGGGA CGAGACCCGC
GACCCCACCA CCCTCGTCGT GGTGGAGGAC GTGTCCGACC TCTGGGCGCT GGAGCGGTCC
GGCGCGGTCA AGGCGCGCTA CCACGTGCTC GGCGGCGTGC TCTCGGCGCT CGACGGGGTG
CGGCCGGAGC ACCTTACCAT CGCCCGTCTC GTGGAGCGGG CGGGCGAGCC GGGGGTGAAG
GAGATCATCC TGGCGCTGAA CGCCACCGTC GACGGCCAGA CCACGGCTCA CTACGTCACC
GAGTCGATCA AGCCTTTCGG GCTGACGGTC ACCCGCCTCG CCCACGGCGT GCCCGTCGGC
GGCGAGCTCG ACTATCTCGA CGAGGGCACC CTGACGGCGG CGATCCGCAG CCGCACGGCG
TTCTGA
 
Protein sequence
MPQAVAGPEI ERLIQLLGRM PGLGPRSARR AALQLIKKRE TLLAPLADAM RVAAERIVVC 
RSCGNVDTSD PCTICRDETR DPTTLVVVED VSDLWALERS GAVKARYHVL GGVLSALDGV
RPEHLTIARL VERAGEPGVK EIILALNATV DGQTTAHYVT ESIKPFGLTV TRLAHGVPVG
GELDYLDEGT LTAAIRSRTA F