| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1601 |
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| Symbol | metH |
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| ID | 5834653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1787405 |
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| End bp | 1791157 |
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| Gene Length | 3753 bp |
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| Protein Length | 1250 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641367399 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_001639071 |
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| Protein GI | 163851028 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.179961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTT TCCCCCCCGT CGACGGCACC GAGATCGAGC GCGCCCTACG CCAGCGCGCG
TCGGAAAAGA TCCTCGTCCT CGACGGGGCG ATGGGCACGG TGATCCAGCG GCTCAAATAC
ACGGAAGAGG ATTTCCGGGG TGAGCGCTTC AAGGATCACA GCCACGATCA GAAGGGCAAC
AACGACCTCC TGATCCTGAC GCAGCCCGAC GCGATCCGGC AGATCCACCT CGACTACTTC
CTCGCCGGCG CCGACGTCTG CGAGACGAAC ACGTTTTCCG GCACCACGAT CGCCCAGGCC
GATTACGGCA TGGAATCGAT CATCCACGAG CTGAACGCCG AGGGCGCCCG CCTCGCCCGC
GAGGCCGCCA AGCTCGCCGA AGAACAGGAC GGCCGCCGCC GCTTCGTCGC TGGCGCCATC
GGCCCGACCA ACCGCACGCT GTCGATCTCG CCGGACGTGA ATAATCCCGG CTACCGCGCC
GTGACGTTCG ATGGGGTGAA GCAGGCCTAT GTCGAGCAGG TGCGCGGCCT GATCGACGGC
GGCGCCGAAC TGATCCTGAT CGAGACGATC TTCGACACGC TCAACGCCAA GGCGGCGATC
GCCGCCGCGT GGCAAGTGTT CGACGAGACC GGCATCCGCC TGCCGATCCA GATCTCCGGC
ACCATCACCG ATCTCTCCGG CCGCACGCTG TCGGGCCAGA CGCCGGCCGC GTTCTGGAAT
TCGCTGCGCC ATTCGAGCCC GCTGACCTTC GGCCTCAACT GCGCGCTCGG CGCCAAGGAA
ATGCGCGGCC ACATCGCCGA GCTGTCGCGC ATCTGCGACA CCCTGGTCTG CGCCTATCCG
AATGCCGGCC TGCCCAACGA ATTCGGCCTC TACGACGAGA GCCCGGAGGC CATGGGCAAG
CTCGTGGGCG AGTTCGCCGC CTCGGGCCTC GTCAACATGG TCGGCGGCTG CTGCGGCACG
ACACCGGACC ATATCCGCGC CATCGCCGAG GCCGTCGCCG ACAAGAAGCC GCGCGAGATC
CCCGAGATCC CGCGCCTGAT GCGCTTGTCG GGCCTCGAAC CCTTCGTGCT GACGAAGGAG
ATCCCCTTCG TGAACGTGGG TGAGCGCACC AACGTCACCG GCTCGGCCAA ATTCCGCAAG
CTCATCACCA ACAACGATTA CGCCGCCGCG CTCGATGTCG CCCGCGATCA GGTCGCGGCC
GGCGCCCAGG TCATCGACGT CAACATGGAT GAGGGCCTGC TCGACAGTGA GAAGGCGATG
GTCGAGTTCC TCAACCTCGT CGCCGCCGAG CCCGACATCG CCCGCGTGCC GGTGATGGTC
GATTCCTCGA AGTTCGAGGT GATCGAGGCC GGGCTGAAAT GCATCCAGGG CAAGCCCATC
GTGAACTCGA TCTCCATGAA GGAGGGCGAG GCGAAGTTCA TCGAGGCCGC CAAGATCTGC
CGCTCCTATG GCGCAGCGGT CGTCGTCATG GCCTTCGACG AGCAGGGCCA GGCCGATTCC
TACGAGCGCA AGGTCGAGAT CTGCACCAAG GCCTACAAGA TCCTCACCGA GCAGGTCGGC
TTCCCGCCGG AAGACATCAT CTTCGACCCG AACATCTTCG CGGTGGCCAC GGGTATCGAG
GAGCACAACC CCTACGGTGT CGCCTTCATC GAGGCGACCC GCACGATCCG TGAGACCCTG
CCCCACGCCC ACATCTCCGG CGGCGTCTCG AACCTGTCCT TCGCCTTCCG CGGCAACGAG
CCGGTGCGCG AGGCGATGCA CGCGGTGTTC CTGTTCCACT GCATCAAGGC CGGCATGGAC
ATGGGCATCG TCAATGCCGG CCAGTTGGCC GTCTACGATG AGATCCCGGC CGAACTCCGC
GAGCTGTGCG AGGACGTGGT CCTCAACCGC CGCGAGGACT CGACCGAGCG CCTGTTGGAG
GCCGCCGAGC GCTTCAAGAC CGGCGCCTCG GCCCAGGCCA AGACCGCCGA CCTGACGTGG
CGTGAGGCGC CCGTCGCCAA GCGCATCGAG CACGCGCTGG TCAACGGCAT CACCGAGTAC
ATCGTCGCCG ACACCGAGGA GGCACGCAAA GAGGCCGCGC GTCCGCTCCA CGTCATCGAA
GGCCCGCTGA TGGCCGGCAT GAACGTGGTC GGCGACCTGT TCGGCTCGGG CAAGATGTTC
CTGCCGCAGG TGGTGAAGTC CGCCCGCGTG ATGAAGCAGG CGGTGGCCTA TCTCGAACCC
TTCATGGAGG AGGAGAAGCG GGCCAATGGC GGCGACGGCA AGCGCCAGGC CGCCGGCAAG
GTGCTGATGG CCACCGTGAA GGGCGACGTC CACGACATCG GCAAGAACAT CGTCGGCGTG
GTTCTGGCCT GCAACAATTA CGAGATCATC GATCTCGGCG TGATGGTGCC GGCGGCCAAG
ATCCTCGAGA CGGCCAAGCG CGAGAACGTC GACATCGTCG GCCTGTCGGG CCTCATCACC
CCCTCGCTCG ACGAGATGGT GCATGTCGCC GCCGAGATGG AGCGCGAGGG CATGGAGATG
CCGCTGCTGA TCGGCGGCGC CACCACCAGC CGCGTCCACA CCGCGGTGAA GATCCACCCG
GCCTACGCCA AGGGTCAGGC GGTCTACGTC ACCGATGCGA GCCGCGCCGT CGGCGTGGTG
TCGAGCCTCA TCTCGAAGGA GACCCGCGGG GCCACCGTGG AGAAGGTGCG CGCCGAGTAC
GCCAAGGTCG CCGATGCGCA CCGCCGCTCC GAGGCCGACA AGCAGCGCCT GCCGCTCGCC
AAGGCGCGGG CGAACGCCTT CAAGGTGGAT TGGTCGGCCT ACAAGCCGGC CAAGCCCAGC
TTCACCGGCA CCCGCGTCTA CGGTTCCTAC GAGGTGGCGG ACCTCGTCCC TTACATCGAC
TGGACGCCGT TCCTGCAGAC CTACGAGTTC AAGGGCCGCT ACCCCGCGAT CCTCGACGAT
CCCGAGCAGG GCCCGGCGGC GCGTGCGCTG TTCGAGGACG CGCAGGTGAT GCTCAAGCAG
ATCGTGGAGG AGCGCTGGTT CAACCCGAAG GCGGTGATCG GCTTCTGGCC GGCCAACAGC
GTTGGCGACG ACATCCGGCT CTTCACCGGC GAGAGCCGGC AGGAGATGCT CGCGACCTTC
CACGGCCTGC GCCAGCAGCT CTCGAAGCGC GACGGGCGCG CCAACACCTG CATCTCCGAC
TTCGTGGCGC CGGCCGAGAC CGGCATCGCG GATTATGTCG GCGCCTTCGT GGTGACAGCG
GGCCTGGAGG AGGTGCGCAT CGCCGAGCGC TTCGAGCGGG CCAACGACGA TTACCGCTCG
ATCCTCGTGA AGGCGCTCGC CGACCGCATC GCCGAAGCCT TCGCCGAGCG GATGCACGAG
CGCGTCCGCA AGGAGTTCTG GGGCTATGCG CCGGACGAGG CGTACGCCCC CGAAGAGCTG
GTCTCGGAAA AGTACGACGG CATCCGGCCC GCGCCGGGCT ACCCGGCCCA GCCCGACCAT
ACGGAAAAGG TGCAGTTGTT CGATCTGCTC AAGGCGGAGA GCCGCATCGG CGTGAAGCTC
ACCGAGTCCT ACGCCATGTG GCCGGGCTCC TCGGTCTCGG GCCTCTACCT CGCCCATCCC
GACGCGCATT ACTTCGGCGT CGCCAAGGTG GAGCGGGATC AGGTCGAGGA CTACGCCCTG
CGCAAGGGAA TGGATGTGAG CGAGGTCGAG CGCTGGCTCG GGCCGATCCT CAACTACGAC
CCGGTCCGCT ACCTCAAGGC CGCGGCCGAG TAG
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| Protein sequence | MTAFPPVDGT EIERALRQRA SEKILVLDGA MGTVIQRLKY TEEDFRGERF KDHSHDQKGN
NDLLILTQPD AIRQIHLDYF LAGADVCETN TFSGTTIAQA DYGMESIIHE LNAEGARLAR
EAAKLAEEQD GRRRFVAGAI GPTNRTLSIS PDVNNPGYRA VTFDGVKQAY VEQVRGLIDG
GAELILIETI FDTLNAKAAI AAAWQVFDET GIRLPIQISG TITDLSGRTL SGQTPAAFWN
SLRHSSPLTF GLNCALGAKE MRGHIAELSR ICDTLVCAYP NAGLPNEFGL YDESPEAMGK
LVGEFAASGL VNMVGGCCGT TPDHIRAIAE AVADKKPREI PEIPRLMRLS GLEPFVLTKE
IPFVNVGERT NVTGSAKFRK LITNNDYAAA LDVARDQVAA GAQVIDVNMD EGLLDSEKAM
VEFLNLVAAE PDIARVPVMV DSSKFEVIEA GLKCIQGKPI VNSISMKEGE AKFIEAAKIC
RSYGAAVVVM AFDEQGQADS YERKVEICTK AYKILTEQVG FPPEDIIFDP NIFAVATGIE
EHNPYGVAFI EATRTIRETL PHAHISGGVS NLSFAFRGNE PVREAMHAVF LFHCIKAGMD
MGIVNAGQLA VYDEIPAELR ELCEDVVLNR REDSTERLLE AAERFKTGAS AQAKTADLTW
REAPVAKRIE HALVNGITEY IVADTEEARK EAARPLHVIE GPLMAGMNVV GDLFGSGKMF
LPQVVKSARV MKQAVAYLEP FMEEEKRANG GDGKRQAAGK VLMATVKGDV HDIGKNIVGV
VLACNNYEII DLGVMVPAAK ILETAKRENV DIVGLSGLIT PSLDEMVHVA AEMEREGMEM
PLLIGGATTS RVHTAVKIHP AYAKGQAVYV TDASRAVGVV SSLISKETRG ATVEKVRAEY
AKVADAHRRS EADKQRLPLA KARANAFKVD WSAYKPAKPS FTGTRVYGSY EVADLVPYID
WTPFLQTYEF KGRYPAILDD PEQGPAARAL FEDAQVMLKQ IVEERWFNPK AVIGFWPANS
VGDDIRLFTG ESRQEMLATF HGLRQQLSKR DGRANTCISD FVAPAETGIA DYVGAFVVTA
GLEEVRIAER FERANDDYRS ILVKALADRI AEAFAERMHE RVRKEFWGYA PDEAYAPEEL
VSEKYDGIRP APGYPAQPDH TEKVQLFDLL KAESRIGVKL TESYAMWPGS SVSGLYLAHP
DAHYFGVAKV ERDQVEDYAL RKGMDVSEVE RWLGPILNYD PVRYLKAAAE
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