Gene Mext_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1588 
Symbol 
ID5831816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1770985 
End bp1771539 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content69% 
IMG OID641367386 
Producthypothetical protein 
Protein accessionYP_001639058 
Protein GI163851015 
COG category[S] Function unknown 
COG ID[COG5468] Predicted secreted (periplasmic) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0287437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTGG CGAGGAACAG GCCGGGGGTT CGGATCGCGC GGCTCGCGCT CGCCGCCGGC 
CTCGCGCTGA ATCTCGGCGC CTGCTTTCGT CCCCTCTACG GGCCGACGGC ATCGGGCGAA
TCGATGCAGG GTCTGCTCGC CGCGATCCAG GTCGATGACG TGAACATGGC GCAGGATCAG
GAGCGCCTCG GGCACTACCT GCGCAGCGAG CTGATCTTCG ATCTCGACGG CTCCGGCCAA
GCTGCCGTGC CGAAGCGCTA CCGGCTGAAG ATGCAGGGCT CCGAGCAGGT CCAGACGCCG
ATCGTCTCCT CGACCACGGC GCGGGCGGAA GCCGGCACCA TCGTCGGCAC GGTGAAGTTC
TCGCTGGAGA GCCTGGACGG GCGCCGCGTC CTCACCGAGG GCGTCGCGAC CGGCACCGCG
ACCTACGATC GCTCGATCCA GCGTTTCGCC TCGCTGCGCG CCGCGCGCGA CGCCGAGATC
CGCCTCGCCA AGGTGCTCGC CGAACAGATC AAGACCCGGA TCGCCTCCGT CCTCACCGTC
AAGACGAACC CCTGA
 
Protein sequence
MGVARNRPGV RIARLALAAG LALNLGACFR PLYGPTASGE SMQGLLAAIQ VDDVNMAQDQ 
ERLGHYLRSE LIFDLDGSGQ AAVPKRYRLK MQGSEQVQTP IVSSTTARAE AGTIVGTVKF
SLESLDGRRV LTEGVATGTA TYDRSIQRFA SLRAARDAEI RLAKVLAEQI KTRIASVLTV
KTNP