Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1588 |
Symbol | |
ID | 5831816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1770985 |
End bp | 1771539 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641367386 |
Product | hypothetical protein |
Protein accession | YP_001639058 |
Protein GI | 163851015 |
COG category | [S] Function unknown |
COG ID | [COG5468] Predicted secreted (periplasmic) protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0287437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGTGG CGAGGAACAG GCCGGGGGTT CGGATCGCGC GGCTCGCGCT CGCCGCCGGC CTCGCGCTGA ATCTCGGCGC CTGCTTTCGT CCCCTCTACG GGCCGACGGC ATCGGGCGAA TCGATGCAGG GTCTGCTCGC CGCGATCCAG GTCGATGACG TGAACATGGC GCAGGATCAG GAGCGCCTCG GGCACTACCT GCGCAGCGAG CTGATCTTCG ATCTCGACGG CTCCGGCCAA GCTGCCGTGC CGAAGCGCTA CCGGCTGAAG ATGCAGGGCT CCGAGCAGGT CCAGACGCCG ATCGTCTCCT CGACCACGGC GCGGGCGGAA GCCGGCACCA TCGTCGGCAC GGTGAAGTTC TCGCTGGAGA GCCTGGACGG GCGCCGCGTC CTCACCGAGG GCGTCGCGAC CGGCACCGCG ACCTACGATC GCTCGATCCA GCGTTTCGCC TCGCTGCGCG CCGCGCGCGA CGCCGAGATC CGCCTCGCCA AGGTGCTCGC CGAACAGATC AAGACCCGGA TCGCCTCCGT CCTCACCGTC AAGACGAACC CCTGA
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Protein sequence | MGVARNRPGV RIARLALAAG LALNLGACFR PLYGPTASGE SMQGLLAAIQ VDDVNMAQDQ ERLGHYLRSE LIFDLDGSGQ AAVPKRYRLK MQGSEQVQTP IVSSTTARAE AGTIVGTVKF SLESLDGRRV LTEGVATGTA TYDRSIQRFA SLRAARDAEI RLAKVLAEQI KTRIASVLTV KTNP
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