| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1574 |
|---|
| Symbol | |
|---|
| ID | 5831715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1755331 |
|---|
| End bp | 1756173 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641367372 |
|---|
| Product | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
|---|
| Protein accession | YP_001639044 |
|---|
| Protein GI | 163851001 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
|---|
| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.704988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0789444 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACACG CCGATCTCGA AAAGACCATC GAAGCCGCCT GGGAGGAGCG CGCCGGCATC
TCGACCGCGA CCACCGGCGC CGTGCGCGAG GCGGTGGACG AGGCGCTGAA CCTGCTCGAT
TCCGGTCAGG CCCGGGTCGC CGAGAAGGCG GGCGATTCCT GGCAGGTCAA CCAGTGGCTC
AAGAAGGCGG TGCTGCTCTC CTTCCGCCTC AACGACATGG TGCCGATCGA GGGCGGACCC
GGCTCCTCCG CGTGGTGGGA CAAGGTGCCC TCGAAGTTCG ACAACTGGGG CGAGGCCGAG
TTCCGCGCCG CTGGCTTCCG CGCCGTGCCG GGCTGCTTCG TGCGGCGCGG CTCCTACATC
GCGCCGGGCG CGGTGCTGAT GCCGAGCTTC ATCAACCTCG GCGCCCATGT CGGCGAGGGC
ACCATGGTCG ATACCTGGGT GACGATCGGC TCCTGCGCTC AGGTCGGCAA GAACTGTCAC
ATCTCGGGTG GGGCCGGCAT CGCCGGCGTG CTGGAGCCGC TCCAGGCCAA CCCGGTCATC
ATCGAGGACA ACTGCTTCGT CGGTGCCCGC GCCGAGGTCG CCGAGGGCGT GATCATCGGC
GAGGGCTCGG TCCTGTCGAT GGGCGTCTAT ATCGGCGCCT CGACCCGGAT CATCGACCGC
ACCACGGGCG AGACCTTCTA CGGCCGCGTG CCGCCCTACT CCGTGGTGGT GTCGGGCACG
ACGCCCGGCA AGCCGCTGCC CGACGGCACC CCCGGCCCCG GCCTCTACTG CGCCGTGATC
GTCAAGCGCG TCGATGCCGG CACCCGCGCC AAGACCGGCA TCAACGAGCT GCTGCGGACC
TGA
|
|---|
| Protein sequence | MSHADLEKTI EAAWEERAGI STATTGAVRE AVDEALNLLD SGQARVAEKA GDSWQVNQWL
KKAVLLSFRL NDMVPIEGGP GSSAWWDKVP SKFDNWGEAE FRAAGFRAVP GCFVRRGSYI
APGAVLMPSF INLGAHVGEG TMVDTWVTIG SCAQVGKNCH ISGGAGIAGV LEPLQANPVI
IEDNCFVGAR AEVAEGVIIG EGSVLSMGVY IGASTRIIDR TTGETFYGRV PPYSVVVSGT
TPGKPLPDGT PGPGLYCAVI VKRVDAGTRA KTGINELLRT
|
|---|
| |