| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1564 |
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| Symbol | |
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| ID | 5832777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1745051 |
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| End bp | 1746784 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641367362 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | YP_001639034 |
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| Protein GI | 163850991 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.48094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.707647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCC GCAACGTATC GGATCTCGTG GTCGAAACGC TCCAGCAGGC GGGCGTGCGC
CGCGTTTACG GCCTCGTCGG CGACAGCCTG AACGGGATCA CCGAAGCGAT CCGAGCCCGC
GGCGTCATCG ATTGGGTTCA TGTCCGTCAC GAGGAGGTCG CCGCCTTCGC CGCCGCCGGC
GAGTCGCAGG TGACGGGCGA ACTCGCGGTC TGCGCCGGCT CCTGCGGACC GGGCAACCTC
CACCTCATCA ACGGCCTGTT CGACGCCCAC CGCACCCGCA CGCCGGTCCT GGCGATCGCC
GCGCATATTC CGTCGAGCGA GATCGGCCTC AACTACTTCC AGGCGACGCG GCCCGAGGAG
CTGTTCCGCG ATTGCAGCCA TTTCTGCGAG ACGGTCTCGG ACCCGGAGCA ATTGCCCAAC
GTCCTTGAAG CGGCGATCCG CTCGGCCGTC GGCAAGCGCG GCGTCGCGGT GGTGGTCATC
CCCGGCACCG TCGCGCTGAA GGAAGCGCCC AAGCGCGCCT TGTCCGCCCC CGCGACGCTG
CGCCCCCGCG CACCGGTCAC CGTACCGCCC GCGGACGAAC TCGACCGCTT GGCGGACCTC
CTCAACGGGT CCAAGAAAAT CACGCTTCTG TGCGGACGCG GCTGCGCCGG CGCGCACGCG
CCGCTGATGC GGCTGGCCGA GCGTCTCAAG AGCCCGATCG TCCACGCGCT CGGCGGCAAG
GAGCATGTCG AGCACGATAA TCCCTACGAT GTCGGCATGA CCGGGCTGAT CGGGTTCAGT
TCGGGCTACG CGGCGATGGA AGCCTGCGAG ACCCTGCTGA TGCTGGGGAC CGACTTCCCC
TACCGCCAGT TCTACCCCGA GCACGCCAAG ATCGCGCAGG TCGATCTGCG TCCGGAGAAT
CTGGGCAAGC GCTGCCGGCT CGAACTCGGC CTCACCGGCG ATGTCGCCGC CACCATCGAC
GCGCTGCTGC CGCGCCTGAC CGGCAACGAC AGCGGGCGCC ATCTGGAGGC CAGCCTCAAG
CATTACGCCA AGGCGCGCGA GGACCTCGAC GATCTCGCCA CCGGCAAGGC GGGGCGCAAG
CCGATCCACC CGCAATACCT CACCCGGCTC CTCAGCGAAG CGGCCACCGA GAACGCGGTG
TTCACGGCCG ATGTCGGCAC GCCCACGGTC TGGGCGGCGC GCTACCTCTC CATGACGGCC
GGGCGGCGCC TGATCGGCTC CTGGGCGCAC GGCTCGATGG CGAACGCCCT GCCGCACGCC
ATCGGTATCC AGGCGGCGAG CCCCGGCCGG CAGGTGATCT CACTGTCGGG CGACGGCGGC
TTCGCGATGC TGATGGGCGA CATCCTCACC CTGACGCAGG AGCGGCTGCC GGTGAAGGTC
GTCATCTACA ACAACGGCAC GCTCGGCTTC GTCGAGTTGG AGATGAAGGC CGCGGGCTAT
CTCGAGACCG GCGTCACGCT CGAAAACCCG GATTTCGCGG CCATGGCCCG CGCCATCGGC
ATCCATGCCC ACCGGGTCGA GGATCCGGGT GATTTGGAAG GCGCGATCCA GGACGTGCTG
TCCCATCCCG GCCCGGCCCT CCTCGACGTG GTGACGAACC GCCAGGAACT GGCGATGCCG
CCGAAGCTCC AGGCCGAGCA GGTGAAGGGT TTCAGCCTCT ACGCGCTCCA GGCCGTCATG
AACGGACGCG GCGACGCGAT CCTCGATCTG GCCAAGACCA ACCTGCTGCG CTGA
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| Protein sequence | MATRNVSDLV VETLQQAGVR RVYGLVGDSL NGITEAIRAR GVIDWVHVRH EEVAAFAAAG
ESQVTGELAV CAGSCGPGNL HLINGLFDAH RTRTPVLAIA AHIPSSEIGL NYFQATRPEE
LFRDCSHFCE TVSDPEQLPN VLEAAIRSAV GKRGVAVVVI PGTVALKEAP KRALSAPATL
RPRAPVTVPP ADELDRLADL LNGSKKITLL CGRGCAGAHA PLMRLAERLK SPIVHALGGK
EHVEHDNPYD VGMTGLIGFS SGYAAMEACE TLLMLGTDFP YRQFYPEHAK IAQVDLRPEN
LGKRCRLELG LTGDVAATID ALLPRLTGND SGRHLEASLK HYAKAREDLD DLATGKAGRK
PIHPQYLTRL LSEAATENAV FTADVGTPTV WAARYLSMTA GRRLIGSWAH GSMANALPHA
IGIQAASPGR QVISLSGDGG FAMLMGDILT LTQERLPVKV VIYNNGTLGF VELEMKAAGY
LETGVTLENP DFAAMARAIG IHAHRVEDPG DLEGAIQDVL SHPGPALLDV VTNRQELAMP
PKLQAEQVKG FSLYALQAVM NGRGDAILDL AKTNLLR
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