Gene Mext_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1559 
Symbol 
ID5831772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1739436 
End bp1739942 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content66% 
IMG OID641367357 
Productprotein-export protein SecB 
Protein accessionYP_001639029 
Protein GI163850986 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.664981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATA CCGCGGCACC GAACGGCAAC GGCGCGCAGG GCCAGGATCT CGCGCCCGCG 
ATCAACGCGC TGGCGCAATA CGCCAAGGAT CTCTCCTTCG AGAACCCGAA CGCGCCGCGC
TCCCTGCAGC CGCAGGAGGG TGGCCCTCAG ATCAACATTC AGGTCAACGT CAACGCCCAG
CAGATCGCCG AGGCGGACTT CGAGGTCGAG CTGACGCTCG AGGGCGATGC CAAGATCCAG
AACGAGGTGC TGTTCGCCTT CGAACTGAAG TACGCCGGCA TTTTCCGCAT GCGCAACATC
CCGCAGGAGC AGATCCACCC GGCGGTGATG ATCGAGTGCC CGCGCCTGCT CTTCCCGTTC
GCGCGCCAGA TCGTCGCCGA AGCGGTGCGC AACGGCGGCT TCCCGCCGCT CTACATCGAC
CCGATCGATT TTGTCGGCCT CTATCAGCAG AAGATGATGG AAGCGCAGGC CCAGGGCGGC
CAGCCGGGCG CTCCGCTCGC CTCCTGA
 
Protein sequence
MADTAAPNGN GAQGQDLAPA INALAQYAKD LSFENPNAPR SLQPQEGGPQ INIQVNVNAQ 
QIAEADFEVE LTLEGDAKIQ NEVLFAFELK YAGIFRMRNI PQEQIHPAVM IECPRLLFPF
ARQIVAEAVR NGGFPPLYID PIDFVGLYQQ KMMEAQAQGG QPGAPLAS